Gene Information

Name : cbh (zj316_0150)
Accession : YP_007412835.1
Strain : Lactobacillus plantarum ZJ316
Genome accession: NC_020229
Putative virulence/resistance : Virulence
Product : Choloylglycine hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.24
Position : 164255 - 165229 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence :
ATGTGTACTGCCATAACTTATCAATCTTATAATAATTACTTCGGTAGAAATTTCGATTATGAAATTTCATACAATGAAAT
GGTTACGATTACGCCTAGAAAATATCCACTAGTATTTCGTAAGGTGGAGAACTTAGATCACCATTATGCAATAATTGGAA
TTACTGCTGATGTAGAAAGCTATCCACTTTACTACGATGCGATGAATGAAAAAGGCTTGTGTATTGCGGGATTAAATTTT
GCAGGTTATGCTGATTATAAAAAATATGATGCTGATAAAGTTAATATCACACCATTTGAATTAATTCCTTGGTTATTGGG
ACAATTTTCAAGTGTTAGAGAAGTGAAAAAGAACATACAAAAACTAAACTTGGTTAATATTAATTTTAGTGAACAATTAC
CATTATCACCGCTACATTGGTTGGTTGCTGATAAACAGGAATCGATAGTTATTGAAAGTGTTAAAGAAGGACTAAAAATT
TACGACAATCCAGTAGGTGTGTTAACAAACAATCCTAATTTTGACTACCAATTATTTAATTTGAACAACTATCGTGCCTT
ATCAAATAGCACACCCCAAAATAGTTTTTCGGAAAAAGTGGATTTAGATAGTTATAGTAGAGGAATGGGCGGACTAGGAT
TACCTGGAGACTTGTCCTCAATGTCTAGATTTGTCAGAGCCGCTTTTACTAAATTAAACTCGTTGCCGATGCAGACAGAG
AGTGGCAGTGTTAGTCAGTTTTTCCATATACTAGGGTCTGTAGAACAACAAAAAGGGCTATGTGAAGTTACTGACGGAAA
GTACGAATATACAATCTATTCTTCTTGTTGTGATATGAACAAGGGAGTTTATTACTATAGAACTTATGACAATAGTCAAA
TTAACAGTGTCAATTTAAACCATGAGCACTTGGATACGACTGAATTAATTTCTTATCCATTACGATCAGAAGCACAATAC
TATGCAGTTAACTAA

Protein sequence :
MCTAITYQSYNNYFGRNFDYEISYNEMVTITPRKYPLVFRKVENLDHHYAIIGITADVESYPLYYDAMNEKGLCIAGLNF
AGYADYKKYDADKVNITPFELIPWLLGQFSSVREVKKNIQKLNLVNINFSEQLPLSPLHWLVADKQESIVIESVKEGLKI
YDNPVGVLTNNPNFDYQLFNLNNYRALSNSTPQNSFSEKVDLDSYSRGMGGLGLPGDLSSMSRFVRAAFTKLNSLPMQTE
SGSVSQFFHILGSVEQQKGLCEVTDGKYEYTIYSSCCDMNKGVYYYRTYDNSQINSVNLNHEHLDTTELISYPLRSEAQY
YAVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 2e-110 71
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 3e-110 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbh YP_007412835.1 Choloylglycine hydrolase VFG2162 Protein 3e-114 68