Gene Information

Name : mtsB (zj316_1130)
Accession : YP_007413815.1
Strain : Lactobacillus plantarum ZJ316
Genome accession: NC_020229
Putative virulence/resistance : Virulence
Product : Manganese ABC transporter, permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1175922 - 1176797 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence :
ATGATGCAATCAATTACGACCTTTATGGCTGCTTTGGGGAAGTATGATTTCTTACAAAGTGCGCTAATTACGGCTATTAT
GGTCGGGGTCATGTCAGGAATTATTGGTAGTTTTATTATTTTACGGGGCATGTCGATGATGGGCGATGCCATCTCGCATG
CCGTTTTACCTGGTGTTGCGGTAGCTTATATGCTCGGTATCAACGTCCTAATTGGTGCTTCGGTTTTTGGAATTCTAGCC
GCTAGCTTGATCGGATTCGTTGCGAGCCGTAGTAAGATTAAGACTGACACCTCAATTGGGATTGTCTTCAGTGCGTTTTA
CGCACTCGGTTTTATCCTAATTTCATTAGCTGAAAGTTCGACGAACTTGCACCACATCTTATTCGGTAACATCCTCGCTG
TGAGTGATACTGATATGATGACGACGACGGTCGTGTTAGGACTAGTGATTTTATTCGTGGTCTTCTTCTACAAGGAATTA
CTGATTACGTCATTTGATCCGACCTTTGCGAAGACTTATGGTCTCAAGGTCCAACTGTTACATTACGCGTTAATGCTGGT
CTTAACGCTAGTGACCGTTTCAGCGCTACAAACCGTCGGGATCATTTTAGTGGTCGCGATGTTGATTACACCGGCTGCGA
CGGCCTTTCTATGGACAGAACGACTGGCAGTCATGCTTGGACTGTCAGCCTTAATTGGGGTCTTGTCCTCAGTGGTGGGC
TTATATCTCAGCTACACGTTGAACTGGGCTTCTGGTCCGGCCATCGTGCTAGTAGCGGCTATTTTCTTCGGTATTTCTTT
CATCATCTCACCTAAGCAGGCCTTGTTGCCGACGCTTTGGAAAGGGCAAGCAGCAGCGCGACGGGTGACAGCATGA

Protein sequence :
MMQSITTFMAALGKYDFLQSALITAIMVGVMSGIIGSFIILRGMSMMGDAISHAVLPGVAVAYMLGINVLIGASVFGILA
ASLIGFVASRSKIKTDTSIGIVFSAFYALGFILISLAESSTNLHHILFGNILAVSDTDMMTTTVVLGLVILFVVFFYKEL
LITSFDPTFAKTYGLKVQLLHYALMLVLTLVTVSALQTVGIILVVAMLITPAATAFLWTERLAVMLGLSALIGVLSSVVG
LYLSYTLNWASGPAIVLVAAIFFGISFIISPKQALLPTLWKGQAAARRVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 7e-60 60
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 5e-60 60
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-39 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-39 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 8e-40 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-39 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mtsB YP_007413815.1 Manganese ABC transporter, permease protein BAC0442 Protein 5e-42 43
mtsB YP_007413815.1 Manganese ABC transporter, permease protein BAC0352 Protein 5e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mtsB YP_007413815.1 Manganese ABC transporter, permease protein VFG0528 Protein 5e-40 42