Gene Information

Name : SMWW4_v1c08610 (SMWW4_v1c08610)
Accession : YP_007404685.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 967869 - 970109 bp
Length : 2241 bp
Strand : -
Note : -

DNA sequence :
ATGAAACGCAAACACCTTTGGGTTTTGAATCCTTGTCTGCTGGCGATGCTTGCGCCGACGGCTTGGGCAGAAGGTCAGAA
AGCCGGCGCCGAAGAGCAGATGGTGGTCTCCGCCAGCCGTTCACACCGCAGCACGGCGGAAATGGCGCAAACCACCTGGG
TGATCGAAAGCCAGGAGATCGAACAGCAGGTTCAGGGCGGCAAAGAGATCAAGGACATGTTGGCGCAGCTGATCCCCGGC
ATGGACGTCAGCGGCCAGGGCCGCACCAACTATGGTATGAATATGCGCGGCCGCTCAATGATGGTGATGATTGACGGCGT
GCGCCTGAATTCATCGCGCAGCGACAGCCGCCAGTTGGATTCGATCGATCCATTCAATATCGATCATATCGAGGTGATTT
CCGGCGCGACCTCGCTGTACGGCGGCGGCAGCACCGGCGGCCTGATCAATATCGTCACCAAAAAAGGACAACAGGAACAG
CAGGTCGAGTTGCAGGTCGGCGGTAAAACCGGCTTTGGCGGCCATAACGATCACGACGAGAACGTGGCGGCGGCGGTCAG
CGGCGGCAACGACAACGTCTCTGGGCGCCTGTCCGTTTCTTACCAGCGCTATGGCGGCTGGTATGACGGCAAAGGCAATG
AGGTATTGATCGACAATACCCAAACCGGCCTGCAGTATTCCGATCGCCTCGACGTGATGGGCACCGGCACCCTCAACATC
GACGATCATCAACAGCTGCAGCTGACCACCCAATACTACAAAAGCCAATCCGACGGCGATCACGGCCTGTTCCTGGGAGA
GAACTTTGCGGCGGTGACCGGCAACGCCAAGGCATATAACAGCGGTAACTTAAATTCCGACCGCATCCCCGGCACCGAGC
GCCACCTGATCAACCTGCAATATTCCAACACAGATTTCCTCGGCCAGGATCTGGTGGCGCAGGTCTACTACCGCGACGAA
ACGTTGACCTTCTACCCGTTCCCGACGCTGGCGGGCAAAGCACCGAACTATTACGTCAGCAGCATTGGCGCTTCGCAGCA
AAAAACCGATTTCTACGGTGGCAAGCTGACGTTAAACAGCAAACCTGTCGACGCACTGACGCTGACTTACGGCATTGACG
CCGAGCATGAAAGCTTCAACGCCAACCAGCAGTTCTTCAACCTGGCGAAGGCTCAGCAGTCGGGCGGCATGACGCTGGAG
AACGCTTACAGCACCGGCCGCTACCCGAGCTATACCACCAGCAACCTGGCGTCGTTCCTGCAGGCCAGCTACGACATCAA
CCCGATCTTCACCCTGAGCGGCGGCGTGCGTTATCAGTACACCGAAAACAAGATTGATGACTTCGTCGGTTATAACCAGC
AGCAGGCAATCGCCACCGGCGCCGCGACGTCCGCCGACGCTATACCGGGCGGGAAAACCGACTACAACAACGCGCTGTTC
AATGCCGGCCTGTTGGCACACCTGACCGAGCGCCAGCAAACCTGGTTCAACTTCTCTCAGGGCTTTGAGATCCCGGATCC
GGGCAAATATTACGGTAACGGCACCTACGCGTTGAACGGCGGACATTACCAGTTGCTGAAGAGCGTTAACGTCGGCGATT
CCAAGCTGGAAGGCATCAAGGTCAATGCCTACGAGCTGGGCTGGCGCTATACCGGCGATAACCTGCGCACGCAAATCGCC
GCCTACTACTCGCTGTCCGACAAGAGCATCGCCATCAACAAAACCGACATGACCATTAACGTCAATGCGGATAAGCGGCG
CATCTATGGGCTGGAAGGGGCGGTGGACTACTTCTTTGAAGACAGCGACTGGAACGCCGGCACCAACTTCAACGTTATCC
GCTCCGAAACCAAGGTCAACGGCGAATGGAAGAAGCTGGTAGTCGATACCGCCAGCCCATCGAAAGTCACCGCTTATGTC
GGCTGGGCGCCGGGCGACTGGAATCTGCGTTTACAGTCGCAGCAAACCTTCGACGTGTCGGACGATGGCGATTACACCAA
GGCCAATTCCACCCAGGGCCGCAAAATCGATGGCTACAACACCCTCGATTTCCTCGGCAGCTATACCCTACCGGTAGGGA
AAATCAGCTTCAGCGTGGAAAACTTGCTGGACAAGGAATACACCACCGTTTGGGGCCAACGCGCGCCGATCCTGTACAGC
CCGACCTACGGATCGCCTGAGCTGTACAGCTATAAAGGCCGCGGACGCACCTTCGGCTTGAACTATTCGGTGTTATTCTG
A

Protein sequence :
MKRKHLWVLNPCLLAMLAPTAWAEGQKAGAEEQMVVSASRSHRSTAEMAQTTWVIESQEIEQQVQGGKEIKDMLAQLIPG
MDVSGQGRTNYGMNMRGRSMMVMIDGVRLNSSRSDSRQLDSIDPFNIDHIEVISGATSLYGGGSTGGLINIVTKKGQQEQ
QVELQVGGKTGFGGHNDHDENVAAAVSGGNDNVSGRLSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSDRLDVMGTGTLNI
DDHQQLQLTTQYYKSQSDGDHGLFLGENFAAVTGNAKAYNSGNLNSDRIPGTERHLINLQYSNTDFLGQDLVAQVYYRDE
TLTFYPFPTLAGKAPNYYVSSIGASQQKTDFYGGKLTLNSKPVDALTLTYGIDAEHESFNANQQFFNLAKAQQSGGMTLE
NAYSTGRYPSYTTSNLASFLQASYDINPIFTLSGGVRYQYTENKIDDFVGYNQQQAIATGAATSADAIPGGKTDYNNALF
NAGLLAHLTERQQTWFNFSQGFEIPDPGKYYGNGTYALNGGHYQLLKSVNVGDSKLEGIKVNAYELGWRYTGDNLRTQIA
AYYSLSDKSIAINKTDMTINVNADKRRIYGLEGAVDYFFEDSDWNAGTNFNVIRSETKVNGEWKKLVVDTASPSKVTAYV
GWAPGDWNLRLQSQQTFDVSDDGDYTKANSTQGRKIDGYNTLDFLGSYTLPVGKISFSVENLLDKEYTTVWGQRAPILYS
PTYGSPELYSYKGRGRTFGLNYSVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 66
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 66
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c08610 YP_007404685.1 TonB-dependent siderophore receptor VFG0619 Protein 0.0 66
SMWW4_v1c08610 YP_007404685.1 TonB-dependent siderophore receptor VFG1085 Protein 0.0 66
SMWW4_v1c08610 YP_007404685.1 TonB-dependent siderophore receptor VFG0936 Protein 0.0 66