|
Name : clpB (SMWW4_v1c08510) Accession : YP_007404675.1 Strain : Serratia marcescens WW4 Genome accession: NC_020211 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 950630 - 953203 bp Length : 2574 bp Strand : + Note : - DNA sequence : ATGCGTCTGGATCGTCTTACTAACAAATTCCAGCTTGCCCTCGCCGATGCCCAGTCACTAGCCCTTGGGCACGACAACCA GTTTATTGAACCGCTACATCTGATGAGCGCCCTGCTCAATCAGGAAGGGGGCACGGTTCGTCCACTATTAACTTCCGCAG GTATCGATGCCGGGCGCGTGCGCACCGAAATCGAACAGGCGCTGTCCCGTTTACCGCAGGTAGAAGGCACCGGTGGCGAC GTTCAACCGTCCCACGAGCTGGTGCGCGTCCTGAACCTGTGCGACAAGCTGGCGCAGAAGCGCGCGGATAAATTCATTTC TTCCGAGCTGTTTGTGCTTGCGGTGCTGGAAGACCGCGGCTCGTTGACCGACTTGTTGAAAGCGGCCGGCGCAACGGCCG ACAAAATCAGCAAAGCCATTGAACAAATGAGAGGCGGTGACAGCGTGGAAGACCAAGGCGCCGAAGACCAACGGCAAGCA TTGAAGAAATATACCATCGATCTGACCGAACGTGCCGAGCAGGGCAAACTTGACCCGGTGATTGGCCGTGACGAAGAGAT CCGCCGCACCATTCAGGTGCTGCAACGCCGCACCAAAAACAACCCGGTACTTATCGGCGAACCTGGCGTGGGTAAAACCG CTATCGTCGAAGGCCTGGCGCAGCGCATCATCAACGGCGAAGTGCCGGAAGGGTTGAAGCACAAGCGCGTATTGTCCCTC GATATGGGCGCTTTGATCGCCGGCGCCAAATATCGCGGCGAGTTTGAAGAGCGTCTGAAAGGCGTGCTCAACGATCTGGC CAAGCAGGAAGGCAGCGTGATCCTGTTTATCGACGAACTGCACACCATGGTCGGCGCCGGTAAGGCGGATGGCGCAATGG ATGCGGGCAACATGCTCAAACCGGCGCTGGCGCGCGGCGAGCTGCACTGCGTCGGTGCCACCACGCTGGATGAGTATCGT CAATATATAGAGAAGGATGCGGCCCTCGAACGTCGTTTCCAGAAAGTGTATGTGGCGGAGCCGAGCGTGGAAGACACTAT CGCTATTCTGCGCGGCCTGAAAGAGCGTTACGAACTGCACCACCACGTGCAGATCACCGATCCGGCCATCGTGGCGGCGG CAACGCTTTCGCACCGTTATATCGCCGATCGTCAATTGCCGGACAAGGCTATTGACCTGATCGACGAAGCGGCGTCCAGC ATTCGCATGCAGATGGACTCCAAGCCTGAATCGCTCGACAGGCTTGAGCGCCGCATCATTCAGTTGAAGCTGGAACAGCA GGCGCTGAATAAAGAGTCGGACGACGCCAGTAAGAAACGCCTGGAAATGCTCAGCGATGAGCTGGGGCAGAAAGAACGCG AATATTCGGAGCTGGAAGAAGAGTGGAAAGCGGAAAAAGCGTCACTCTCCGGTACTCAGAACATCAAGGCGGAACTCGAG CAGGCCAAAATCACCCTGGAGCAGGCGCGCCGCGTCGGCGATTTGGGGCGGATGTCGGAACTGCAGTACGGCAAGATCCC TGAGCTGGAGAAACAGCTCGCCGCTGCCACGCAGGCCGAAGGCAAGAGCATGAAGCTGCTGCGCAACCGGGTAACCGATG CGGAGATTGCCGAAGTGCTGGCGCGCGCGACCGGGATCCCGGTGGCCAGAATGCTGGAAGGCGAGCGCGACAAGCTGCTG CGCCTGGAGCAAGAGCTGCATTCGCGGGTGATCGGCCAGGACGAAGCGGTCAGCGCGGTCTCTAATGCTATCCGCCGCAG CCGCGCCGGGTTGTCCGATCCTAACCGGCCGATCGGTTCGTTCCTGTTCCTTGGCCCGACCGGGGTGGGGAAAACCGAGC TTTGCAAGGCGCTGGCTTCGTTCCTGTTCGACAGCGACGACGCCATGGTGCGTATCGACATGTCCGAGTTTATGGAGAAA CACTCCGTTTCTCGTCTGGTCGGCGCGCCTCCGGGCTATGTCGGTTATGAAGAGGGCGGCTACCTGACGGAAGCCGTACG TCGTCGGCCTTATTCGGTGATCCTGCTGGATGAAGTCGAGAAAGCGCACCCAGACGTGTTTAACATCCTGCTGCAGGTGT TGGATGACGGCCGCCTGACCGATGGCCAGGGCCGTACCGTCGATTTCCGCAATACCGTGGTGATCATGACGTCCAACCTG GGTTCGGATCTGATCCAGGAGCATTTCGGTCAGATGAACTACGCGCAGATGAAAGAGTCGGTGATGGAGATGGTGAGTCA CCACTTCCGTCCGGAATTCATCAACCGTATCGATGAAGTGGTGGTGTTCCATCCGCTGGGCGAGAAACACATTGCTGCGA TCGCCAAGATTCAGCTGTCGCGTCTGTACAAGCGTTTGGAAGAGCGCGGTTACGAAGTAACCATGACCGAGCCTGCTCTG GCATTGTTGAGCAAAACCGGTTACGACCCTGTGTATGGTGCGCGTCCGTTGAAACGCGCTATTCAGCAGGAGATCGAGAA CCCGTTGGCGCAGCAAATCCTGTCCGGCAAGCTGATCCCCGGCAAGCTGGTGACGCTGGATGTGGAAAACGACCATATCG TTGCACGCCAATAA Protein sequence : MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGTVRPLLTSAGIDAGRVRTEIEQALSRLPQVEGTGGD VQPSHELVRVLNLCDKLAQKRADKFISSELFVLAVLEDRGSLTDLLKAAGATADKISKAIEQMRGGDSVEDQGAEDQRQA LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSL DMGALIAGAKYRGEFEERLKGVLNDLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS IRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLSDELGQKEREYSELEEEWKAEKASLSGTQNIKAELE QAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATQAEGKSMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDKLL RLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQEHFGQMNYAQMKESVMEMVSHHFRPEFINRIDEVVVFHPLGEKHIAAIAKIQLSRLYKRLEERGYEVTMTEPAL ALLSKTGYDPVYGARPLKRAIQQEIENPLAQQILSGKLIPGKLVTLDVENDHIVARQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-104 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 6e-99 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-99 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007404675.1 | protein disaggregation chaperone | VFG0079 | Protein | 5e-129 | 42 |
