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Name : SMWW4_v1c07630 (SMWW4_v1c07630) Accession : YP_007404589.1 Strain : Serratia marcescens WW4 Genome accession: NC_020211 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 855344 - 856786 bp Length : 1443 bp Strand : - Note : - DNA sequence : ATGAACGCGCAAATCAGCGAAGAGGTTCACGCCCTGTGCCGGCGCTATCAGGCGCTGGCGCTGAGCGAAGACCCGACCAC CCTGACGGTCGCGCTCAGCGAAGAAGCGCCGCAGGGGCTGCTGGCGGCGCTGCGTTTCGCCACCGGCAAGCGCATCCATT TGGAACAATGGCCGGCGGCCAGGCTGGAGATGGCGCTGAACCAGCACCACGAGCCGCTCCCGGCGCCGTTGACGGCCGAA GAGGACACGACCGACATCGCCTACCCCGACGACGGCGATGCGCCGGTGGTACAGTTCATCAACCAGACGCTGCGCCTGGC CATTCAGCGCCGCGCCTCGGACATTCACTTTGAGCCCTTTCGGCAGCATTTTCGCATTCGCCTGCGCATCGACGGCGTGC TGCAAACCCTTGCCTCACCGCCGCCGCAGCTGGCTGCGCGCCTCATCGCCCGGCTGAAGATCCTCGGCCAACTGGATATC GCCGAGCGCCGTCAACCTCAGGACGGGCAGCTCAGCCTGACGCTGGACAGCGCGCGCTATGCCATGCGCATCGCCACCCT GCCGACGTTGCACGGCGAAAAGGTGGTGCTGCGCGTTCAGCAGGGCGAGCAGCAAGAGCTACCGCTGGATCAACTGGGCA TGAGCCGGACGGATCTGGCGCGCTACGCGGCAGCGTTGGCCTGCCCGCAAGGTTTGATCCTGGTGACCGGCCCGACCGGC AGCGGCAAGACGGTAACGTTGTACAGCGGGCTGCGCCAGTTGAATGATGCGCAAAGCAACCTGTGCAGCGTCGAGGATCC GGTCGAGATCCCGCTGTTCGGCGTCAATCAGACCCAGATCAACGCCAAAACCGAGCTGAACTTCACCCGAGTGCTGCGTG CCCTGCTGCGCCAGGATCCGGACGTCATCATGATCGGCGAGATCCGCGATGCGGAAACCGCCGAGATCGCGGTCAAGGCC GCGCAAACCGGCCACCTGGTGCTGTCGACGCTGCATACCAACTCCACGGCTGAAACCCTGACGCGGCTGATGCACATGGG TATCCCCGGCTACCTGCTCGCCGGCTGCCTGAAGCTGGTCGTCGCCCAGCGGCTGGTGCGCAGGCTGTGTCGCCACTGCC GCTACCCGCAAAGCCAGCCGGCGCATTTTCCCACCGCGCTCTGGCCGGAACCGCTGACCGCCTGGCGCGCCGACGGCTGC GAGCACTGCTTCGGCGGCTATTATGGGCGCATCGGCGTGTATGAACTGTTGGCCATTACGCCGGAAATTCAGGCGGCATT GCTGGCGAACGCCGCTCCCAGTCTGCTGGCGGATATCGCCCGCGAACAGGGGCAGCTTTCGCTGCTGCAGGCGGGTCTGG CGCTGGCCGCCGAAGGCACGACCTCGCTGGAAGAACTGTACCGCGTGATCGACGTCGTCCAACTCGGCGTAACCACGCCA TGA Protein sequence : MNAQISEEVHALCRRYQALALSEDPTTLTVALSEEAPQGLLAALRFATGKRIHLEQWPAARLEMALNQHHEPLPAPLTAE EDTTDIAYPDDGDAPVVQFINQTLRLAIQRRASDIHFEPFRQHFRIRLRIDGVLQTLASPPPQLAARLIARLKILGQLDI AERRQPQDGQLSLTLDSARYAMRIATLPTLHGEKVVLRVQQGEQQELPLDQLGMSRTDLARYAAALACPQGLILVTGPTG SGKTVTLYSGLRQLNDAQSNLCSVEDPVEIPLFGVNQTQINAKTELNFTRVLRALLRQDPDVIMIGEIRDAETAEIAVKA AQTGHLVLSTLHTNSTAETLTRLMHMGIPGYLLAGCLKLVVAQRLVRRLCRHCRYPQSQPAHFPTALWPEPLTAWRADGC EHCFGGYYGRIGVYELLAITPEIQAALLANAAPSLLADIAREQGQLSLLQAGLALAAEGTTSLEELYRVIDVVQLGVTTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-63 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-63 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SMWW4_v1c07630 | YP_007404589.1 | type II secretion system protein E | VFG2426 | Protein | 3e-74 | 51 |
| SMWW4_v1c07630 | YP_007404589.1 | type II secretion system protein E | VFG1876 | Protein | 1e-68 | 46 |
| SMWW4_v1c07630 | YP_007404589.1 | type II secretion system protein E | VFG0182 | Protein | 7e-67 | 45 |
| SMWW4_v1c07630 | YP_007404589.1 | type II secretion system protein E | VFG2048 | Protein | 8e-64 | 45 |
| SMWW4_v1c07630 | YP_007404589.1 | type II secretion system protein E | VFG0112 | Protein | 9e-81 | 44 |
| SMWW4_v1c07630 | YP_007404589.1 | type II secretion system protein E | VFG1880 | Protein | 2e-78 | 44 |
