Gene Information

Name : SMWW4_v1c06200 (SMWW4_v1c06200)
Accession : YP_007404446.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : pili assembly chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 694644 - 695369 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence : 
ATGATGAAAATGAAAAAAGTGACGTGGGCGTTGGTGGGAATATTGGCGGCGATCACGCCGGCGACGCAGGCCGCTGTGGC
CCTGGACCGGACCCGCGCGGTCTTTAACGGGGACGGTAAGTCCATCAGCCTGAATATCAGCAACGACAACAAACAATTGC
CTTATCTGGCGCAGGCCTGGCTGGAAGATGCAAAGCAGCAGAAGGTGACGCAGGGGGCGTTGGTGGTGACGCCGCCGGTA
CAGCGGCTGGAGCCAGGCGCGAAGAGCATGCTGCGTGTGTCGGCTACGCCGGCGGCGGCGCAGCTGCCGCAGGACAGGGA
GACGCTGTTTTACTTCAATCTGCGAGAAATCCCGCCGCGCAGTGACAAGCCCAATGTGCTGCAGATTGCGCTACAGACCA
AAATCAAGCTGTTCTATCGGCCGAAGGCCATTGTAGCAGCGCCGGGCACGGTGTGGCAGGACCAGTTGGTGTTGCACGAA
GAAGGGAATGGTTACCGCATCGAGAACCCCACACCGTACTACATCACCGTCATCGGGATCGGGAATACGCCGAAGCAATC
TGAAAGTGGGGCGTTTGAGGTGGTGATGGTGGCGCCGAAAAGCAGCGCGCAGGTGAAAAGCGCACGTTACGCCACGCCTT
ACCTGACTTATATCAACGATTACGGCGGTCGCCCTGTTCTGACGTTCACCTGTACCGGTGGGCGTTGCAGCGCGAAGAAG
GCGTGA

Protein sequence : 
MMKMKKVTWALVGILAAITPATQAAVALDRTRAVFNGDGKSISLNISNDNKQLPYLAQAWLEDAKQQKVTQGALVVTPPV
QRLEPGAKSMLRVSATPAAAQLPQDRETLFYFNLREIPPRSDKPNVLQIALQTKIKLFYRPKAIVAAPGTVWQDQLVLHE
EGNGYRIENPTPYYITVIGIGNTPKQSESGAFEVVMVAPKSSAQVKSARYATPYLTYINDYGGRPVLTFTCTGGRCSAKK
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 1e-73 70
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 2e-79 70
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 9e-79 70
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 9e-79 70
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 9e-79 70
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 7e-79 70
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 6e-79 70
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 4e-79 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c06200 YP_007404446.1 pili assembly chaperone VFG0885 Protein 6e-74 70
SMWW4_v1c06200 YP_007404446.1 pili assembly chaperone VFG1547 Protein 1e-79 70
SMWW4_v1c06200 YP_007404446.1 pili assembly chaperone VFG0896 Protein 4e-79 70