Gene Information

Name : dnaB (SMWW4_v1c44180)
Accession : YP_007408224.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4776372 - 4777727 bp
Length : 1356 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGGGCTGAAGATGCCGCCGCACTCGCTGGAGGCCGAGCAGTCGGTGTTGGGCGGTTTGATGCTGGATAACGAGCG
TTGGGACAACGTGGCGGAGCGCGTGGTCGCCAACGACTTCTTCAGCCGCCCGCATCGCCTGATCTTTACCGAGATGCAGC
GTCTGCTGGAGATGAGCAAGCCTATCGACCTCATCACCCTGTCCGAATCGCTGGAGCAGAAGGGCGAGCTGGACTCGGTC
GGCGGCTTCGCCTACCTGGCCGAGCTGTCGAAGAACACCCCGAGCGCCGCCAACATCGGCGCTTACGCCGACATCGTGCG
CGAGCGCGCGGTGGTGCGCGAGATGATCTCGGTCGCTAACGAGATCGCCGACGCCGGCTACGATCCGCAAGGGCGCAGCA
GTGAAGATCTGCTCGATCTGGCGGAGTCCCGCGTCTTCCAAATCGCCGAGAACCGCGCCAGCAAAGACGAGGGCCCGAAG
GGCATCGAACGCATCCTGGAAGACACCGTGTCGCGTATCGAGCAGCTGTATCAGCAGCCGCACGACGGCGTGACCGGGGT
CGATACCGGCTATCAGGACCTCAACAAGAAAACCGCGGGCATGCAAAAGTCCGATCTGATCATCGTCGCCGCCCGTCCTT
CGATGGGGAAAACCACCTTCGCCATGAACCTGTGCGAAAACGCCGCGATGACCCAGGAAAAACCGGTGCTGATCTTCAGC
CTGGAGATGCCCGGCGAACAGATCATGATGCGTATGCTGGCGTCGCTGTCGCGTGTGGATCAGACGCGCATCCGTACCGG
CCAGCTCGACGATGAGGACTGGGCGCGCATTTCCAGCACCATGGGCATCCTGCTGGAGAAGCGCAACATGTACATCGACG
ACTCCTCCGGCCTGACGCCGACCGAAGTGCGCTCGCGCGCGCGGCGCATTTTCCGCGAGCACGACGGGCTTAGCCTGATC
ATGATCGACTACCTGCAGCTGATGCGCGTGCCGGCCCTGTCCGACAACCGTACGCTGGAGATCGCCGAGATTTCGCGCTC
GCTGAAGGCGCTGGCGAAAGAGCTGCAGGTGCCGGTGGTGGCGCTGTCGCAGCTGAACCGCAGCCTGGAGCAGCGCGCCG
ACAAACGCCCGGTCAACTCCGACCTGCGTGAATCCGGCTCCATCGAGCAGGATGCCGACCTGATTATGTTCATCTATCGT
GATGAGGTGTATCACGAGAACAGCGATCTGAAAGGGATCGCGGAAATTATTATCGGTAAGCAGCGTAACGGCCCGATCGG
CACCGTGCGCCTTACCTTTAACGGCCAGTGGTCGCGTTTCGATAACTACGCGGGGCCACAATACGATGACGAATAA

Protein sequence :
MEGLKMPPHSLEAEQSVLGGLMLDNERWDNVAERVVANDFFSRPHRLIFTEMQRLLEMSKPIDLITLSESLEQKGELDSV
GGFAYLAELSKNTPSAANIGAYADIVRERAVVREMISVANEIADAGYDPQGRSSEDLLDLAESRVFQIAENRASKDEGPK
GIERILEDTVSRIEQLYQQPHDGVTGVDTGYQDLNKKTAGMQKSDLIIVAARPSMGKTTFAMNLCENAAMTQEKPVLIFS
LEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREHDGLSLI
MIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYR
DEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-99 54
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 5e-105 53
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-105 53
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-104 53
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 7e-101 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-89 49
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-89 49
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 7e-85 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-80 46