Gene Information

Name : kdsD (SMWW4_v1c43250)
Accession : YP_007408131.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4680918 - 4681904 bp
Length : 987 bp
Strand : +
Note : -

DNA sequence :
ATGTCGAACATTGAGTTGCAACCGGGCTTCGATTTTCAACAGGCCGGCAAAGAAGTGCTTCAGATAGAGCGTGAAGGGCT
GGCTCAGCTCGACAGCTACATCAACGCAGACTTCACCCGCGCCTGCGAAACCATCGCCGCCTGCGGCGGCAAAGTGGTGG
TGATGGGCATGGGCAAATCCGGCCACATCGGCTGCAAGATCGCCGCGACCTTCGCCAGCACCGGCACGCCCTCATTCTTC
GTTCATCCGGCGGAGGCCAGCCATGGCGATTTGGGCATGGTCACCCCGCAGGACATCGTGCTCGCCATCTCCAACTCCGG
CGAGTCCAGCGAGATCCTGGCGCTGATCCCGGTGTTGAAACGCCAACAGATCACCCTCATCTGTATGACTAACAATCCGG
AAAGCTCGATGGGTAAAGCGGCGGATATCCACCTGTGCATCAAGGTGCCGCAGGAAGCCTGCCCGCTGGGGCTGGCGCCG
ACCACCAGCACCACCGCCACGCTGGTGATGGGCGATGCGCTGGCCGTCGCGCTGCTGAAAGCGCGCGGTTTCACGCCGGA
AGATTTCGCGCTGTCGCATCCGGGCGGCGCACTCGGCCGCAAACTGCTGCTGCGGGTTAGCGATATCATGCACAGCGGCG
ATGAAATTCCCCACGTCAGCGCCGACGCCTCGTTGCGCGACGCGTTGCTGGAAATCACCCGCAAAAATCTGGGCCTGACG
GTGATCTGCGACGATCTGATGAAAATCGCCGGCATCTTTACCGATGGCGACCTGCGCCGGGTGTTCGACATGGGCATCAA
CCTGCACGAGGCGAAGATTGCCGATGTCATGACGCCGGGCGGCGTGCGGGTGCGCCCCAACATCCTGGCGGTCGATGCAT
TGAACCTGATGCAACAACGCCACATCACCGCGCTGCTGGTTGCCGATGGCGACCAGTTGCTGGGTGTGGTACATATGCAT
GACATGCTGCGCGCCGGCGTCGTTTAA

Protein sequence :
MSNIELQPGFDFQQAGKEVLQIEREGLAQLDSYINADFTRACETIAACGGKVVVMGMGKSGHIGCKIAATFASTGTPSFF
VHPAEASHGDLGMVTPQDIVLAISNSGESSEILALIPVLKRQQITLICMTNNPESSMGKAADIHLCIKVPQEACPLGLAP
TTSTTATLVMGDALAVALLKARGFTPEDFALSHPGGALGRKLLLRVSDIMHSGDEIPHVSADASLRDALLEITRKNLGLT
VICDDLMKIAGIFTDGDLRRVFDMGINLHEAKIADVMTPGGVRVRPNILAVDALNLMQQRHITALLVADGDQLLGVVHMH
DMLRAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-49 44
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 7e-50 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 1e-49 44