Gene Information

Name : SMWW4_v1c42490 (SMWW4_v1c42490)
Accession : YP_007408055.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Unknown
Product : phage-related capsid packaging protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4604356 - 4605390 bp
Length : 1035 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAAACGCAAAGGCCGCAAGGCATTTACCACACCGGCGCCAGCCCCAACAGCAGAGCAGAAGCAGGATTTTGAGGC
TTTTACCTTTGGCGAGCCGTCCGCTGTGCTGGATAAGCGGGAAATTCTGGATTACATCGAATGCACAACCAATGGGAAGT
GGTACGAGCCGCCAATCTCATTCGATGGGCTGGCGCGCAGCGTGCGCGCCGCCGTGCATCACAGCTCGCCGATGTACGTT
AAGCGCAACATTTTGGCATCAACGTTTATTCCGCACCGGCTGTTAAGTCAGCAGGAGTTTAGCCGCTATGCACTGGATTA
TCTGGTGTTCGGCAACGCCTATTTAGAAGAACGTCAAAACCGGCTCGGCGCGCCGCTGCAGCTGAAATCCTCCCCGGCCA
AGTACACACGCCGCGGCGTGGATCGCGGCGCTTACTGGTTCGTGCAGGACTGGAAAGAGGCGCACCGCTTCAAGACCGAC
AGCGTTTTTCACCTGATTGAGCCGGACATCAATCAGGAACTTTACGGCCTGCCGGAGTACCTCAGCGCGCTTAACTCCGC
CTGGCTGAACGAGGCGGCGACGCTGTTCCGCCGTAAGTATTACCAGAACGGGGCGCACGCCGGTTACATCCTGTATATGA
CCGACGCCGCGCAAAGTACAAGCGACGTTGACAGAATGCGCCAAGCCATGCGTGATACAAAGGGCTTAGGAAACTTCCGC
AATCTGTTCATGTACGCCCCGAACGGCAAGCCGGACGGCATTAAGATTTTGCCGCTATCCGAGGTCGCCACCAAGGATGA
CTTTTTCAACATCAAGAATGCCAGCCGCGACGATTTGCTAAGTGCGCACCGCGTACCGCCGCAGATGATGGGGATTATCC
CGAACAATACCGGCGGCTTCGGGGACGTGAAAAAAGCCGCTCAGGTGTTTGTACGCAACGAGCTAACACCGCTGCAAGAG
CGCATGAAGGAGGTGAACGACTGGATCGGGGAAGAGGTGATTAGATTCGCGCCGTATGAGTTGCCGACCGAATAA

Protein sequence :
MSKRKGRKAFTTPAPAPTAEQKQDFEAFTFGEPSAVLDKREILDYIECTTNGKWYEPPISFDGLARSVRAAVHHSSPMYV
KRNILASTFIPHRLLSQQEFSRYALDYLVFGNAYLEERQNRLGAPLQLKSSPAKYTRRGVDRGAYWFVQDWKEAHRFKTD
SVFHLIEPDINQELYGLPEYLSALNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSTSDVDRMRQAMRDTKGLGNFR
NLFMYAPNGKPDGIKILPLSEVATKDDFFNIKNASRDDLLSAHRVPPQMMGIIPNNTGGFGDVKKAAQVFVRNELTPLQE
RMKEVNDWIGEEVIRFAPYELPTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 6e-114 71
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 6e-114 71
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 9e-89 57