Gene Information

Name : SMWW4_v1c41520 (SMWW4_v1c41520)
Accession : YP_007407958.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : L-lysine 6-monooxygenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4493764 - 4495059 bp
Length : 1296 bp
Strand : +
Note : -

DNA sequence :
ATGAATCAGCGTTTGGATATCATCGGTATTGGCCTTGGCCCGTCGAATCTTAGCCTGGCAGCCTTAGGAAGTGAAATAGA
GGGATTTACGGGACAGTTCCTTGAGCGCAAACCTCATTTCTCCTGGCATCCAGGGATGATCCTGGCGGATTGCAGCATGC
AGACCAACTTTTTAAAAGATTTAGTGAGCGCGGTTGCCCCAACCAATCGCTACAGCTTTCTCAACTATCTGGTAAAAAAC
AGAAAATTTTATCGTTTCCTGACGACGGAGCAGCGCACCGCATCGCGCGAAGAGTTCGCCGATTACCTCACCTGGGCCGC
CGCCGGGATGGGATCATTGGCATTCAATCAAGACGTTCAGCGGGTCGAATTTGACGATCGGCAGCGCCAGTTTGTGGTGA
CCACCTCGAATAAGGTCTTCCACGCCAAACACGTCAGCATTGGCATAGGCAAGAAAATAAAGTTGCCGGATTGCGTGACG
ACGCAAAGCGATCGCTGTTTCCATGCCAGCGAAATGATGCTGCGCAACCCCGATCTGACCGGCAAACGCGTGGCGATCGT
CGGCGGCGGCCAGAGCGGCGCAGATCTGTTCCTGAATATTTTTAAAGGGGAATGGGGGCAGCCGGCGCAGCTCGACTGGA
TATCGCGCCGCAATAACTACAATGCGCTCGATGAGGCTGCTTTTGCCAACGAATACTTCACGCCCGATTACGTCGAGAGC
TTTTACTCACTGGACAGCGCGGCCAAGCGGCATATGCTGGCCGAACAGAAGATGACCTCAGATGGCATCACCAGTGAGTC
GCTGCTGGCGATTTATCGCGCCATGTACCACCGCTTCGACGTCCTGCGCGAGAAATTATGGGTGCGCCTGCTGCCCAGCC
GTTCGCTGACGGCCGTGAAACACACGCTGGATAACGCCTACCAACTCGAAACGCGTCATCATCTCGATCACGGCCAGGAA
ACCTTCAAGGCGGACGTGGTGATCTTTGCCACCGGTTATCAATCGGCGACGCCTGAGTTCCTTGAGCCTTTGGCCCACCG
GTTGTTAAAGACTGCGGACGGTGAATACCGCATAGCCCCAGACTTTACCTTTGAGTGGGAAGGCCCAGCGGAGAACTGCT
TATTTGCGATGAACGCCAGTATGCATAATCACGGCATTGCCGATCCTCAGCTGAGCCTGATGGCCTGGCGATCGGCCCGC
ATTCTTAATCGGGCGTTAGACCACAAGCCATTTGATCTGGGAACAACGCCGACAGCCATTCAATGGCGCAGTGAAAGCGT
ACCGCCCGCGTTTTAA

Protein sequence :
MNQRLDIIGIGLGPSNLSLAALGSEIEGFTGQFLERKPHFSWHPGMILADCSMQTNFLKDLVSAVAPTNRYSFLNYLVKN
RKFYRFLTTEQRTASREEFADYLTWAAAGMGSLAFNQDVQRVEFDDRQRQFVVTTSNKVFHAKHVSIGIGKKIKLPDCVT
TQSDRCFHASEMMLRNPDLTGKRVAIVGGGQSGADLFLNIFKGEWGQPAQLDWISRRNNYNALDEAAFANEYFTPDYVES
FYSLDSAAKRHMLAEQKMTSDGITSESLLAIYRAMYHRFDVLREKLWVRLLPSRSLTAVKHTLDNAYQLETRHHLDHGQE
TFKADVVIFATGYQSATPEFLEPLAHRLLKTADGEYRIAPDFTFEWEGPAENCLFAMNASMHNHGIADPQLSLMAWRSAR
ILNRALDHKPFDLGTTPTAIQWRSESVPPAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-126 58
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 8e-127 58
iucD AAK71634.1 IucD Virulence SHI-3 Protein 2e-126 58
iucD AAD44749.1 IucD Virulence SHI-2 Protein 1e-126 58
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-126 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c41520 YP_007407958.1 L-lysine 6-monooxygenase VFG1084 Protein 1e-126 58
SMWW4_v1c41520 YP_007407958.1 L-lysine 6-monooxygenase VFG0937 Protein 4e-127 58
SMWW4_v1c41520 YP_007407958.1 L-lysine 6-monooxygenase VFG0618 Protein 6e-127 58