Gene Information

Name : qseB (SMWW4_v1c40990)
Accession : YP_007407905.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : quorum sensing DNA-binding response regulator in two-component regulatory system with QseC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4437787 - 4438449 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAATTCTGTTGATCGAAGATGACAAACTGATCGGGGACGGCATCAAGGCCGGGCTGACCAAACTCGGCTTCAATCT
GGACTGGTTCACCGACGGCGCCGTCGGCAAAAATGCGCTGGACAGCGCGCCGTACGACGCGGTGATCCTCGATCTCAGCC
TGCCGGGCCTCGACGGCCTGGATCTGCTGCGCGAGTGGCGCCAGGCCGGGCAGGACGTGCCGGTATTGATCCTCACCGCC
CGCGATGCGCTGGAGCAGCGGGTCAGCGGGCTGCAAAGCGGCGCCGACGATTATCTGTGCAAGCCGTTCGCGCTGGCCGA
AGTGGCGGCGCGCCTGCAGGCGCTGATCCGCCGTCGCCACGGCCAACTGATGCCGCAGCTGACGCACGGCAACGTGGTGT
TCGACAGCGCCACCCGCAGCGTGAGCTGCAACGGCGAGCCGGTGACGCTGACGCCGCGCGAATTGGCGGTGCTGGAGCTG
TTTCTGCACAACAAAGGGCGCGTGCTGGCGCGGCCGTTGATTCAGGAGAAACTGTACAACTGGGACGACGAAGTGAGCAG
CAACGCGGTGGAGGTGCATATTCACCACCTGCGGCGCAAGCTGGGCAACGGTTTCATCCGTACCATCCACGGCGTGGGTT
ACACGCTGGGGGATGCGCCGTGA

Protein sequence : 
MRILLIEDDKLIGDGIKAGLTKLGFNLDWFTDGAVGKNALDSAPYDAVILDLSLPGLDGLDLLREWRQAGQDVPVLILTA
RDALEQRVSGLQSGADDYLCKPFALAEVAARLQALIRRRHGQLMPQLTHGNVVFDSATRSVSCNGEPVTLTPRELAVLEL
FLHNKGRVLARPLIQEKLYNWDDEVSSNAVEVHIHHLRRKLGNGFIRTIHGVGYTLGDAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-34 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_007407905.1 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC BAC0487 Protein 3e-32 45
qseB YP_007407905.1 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC BAC0638 Protein 9e-23 43
qseB YP_007407905.1 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC BAC0347 Protein 3e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_007407905.1 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC VFG0473 Protein 3e-32 43