Gene Information

Name : xerD (SMWW4_v1c40020)
Accession : YP_007407808.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4332641 - 4333576 bp
Length : 936 bp
Strand : -
Note : -

DNA sequence :
ATGGCGCGGGTGGAAATGCAACAAAGAGAGGACCGCGTGCAACAGCAAGACAATGCGCTGATTGAACAATTCCTGGATGC
GCTGTGGCTTGAGCGCAATCTGGCGGAAAATACGCTGGCCTCCTATCGGCTGGATTTGCAGGCCCTGGGCGCCTGGCTTG
GCCAGCAGAAGACCGATTTGCTGCAGGCGCAGGCGCTGGATCTGCAGGCGTTTCTCGCCGAGCGGGTGGATGGCGGTTAC
AAAGCCACCAGCTCCGCGCGTTTGTTGAGCGCCATGAGGCGCCTGTTTCAATATCTGTACCGCGAAAAGCTGCGCGCCGA
CGATCCCACCGCGCAGCTGGCGTCTCCCAAACTGCCGCAGCGCTTGCCGAAGGATCTGAGCGAGGCGCAGGTCGATGCGT
TGCTGCAGGCGCCCTGCGTCGATCAGCCGCTGGAGCTGCGCGACAAGGCGATGCTCGAAGTGTTGTACGCCACCGGGCTG
CGGGTTTCCGAGCTGGTGGGGCTGAACATCAGCGACGTCAGCCTGCGTCAGGGCGTGGTGCGGGTGATCGGCAAGGGCAA
CAAGGAGCGGCTGGTGCCGCTGGGCGAAGAGGCGGTCTACTGGATCGAAAACTATCTGGAGCACGGCCGCCCATGGCTGG
TCAACGGCCAGACGCTGGATGTGCTGTTCCCCAGCACCCGCTGCCAGCAAATGACCCGACAGACGTTCTGGCATCGCATC
AAACACTATGCCATCCTTGCGGGCATCGACAGCGAGCGTCTGTCGCCGCACGTGTTGCGGCACGCGTTCGCTACCCATTT
GCTGAACCATGGGGCCGATCTCCGTGTCGTACAGATGTTGTTAGGGCACAGCGATCTCTCGACCACGCAAATTTATACTC
ATGTAGCGACCGAACGACTGAAACAGCTACATCAACAGCATCACCCGCGCGCCTGA

Protein sequence :
MARVEMQQREDRVQQQDNALIEQFLDALWLERNLAENTLASYRLDLQALGAWLGQQKTDLLQAQALDLQAFLAERVDGGY
KATSSARLLSAMRRLFQYLYREKLRADDPTAQLASPKLPQRLPKDLSEAQVDALLQAPCVDQPLELRDKAMLEVLYATGL
RVSELVGLNISDVSLRQGVVRVIGKGNKERLVPLGEEAVYWIENYLEHGRPWLVNGQTLDVLFPSTRCQQMTRQTFWHRI
KHYAILAGIDSERLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-59 61
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-59 61