Gene Information

Name : SMWW4_v1c39980 (SMWW4_v1c39980)
Accession : YP_007407804.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4327366 - 4328883 bp
Length : 1518 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGAACAACAAGTACAGGGCGCCGATCAGGCGCTGGATCTCAATAACGAACTGCAGTCCCGCCGCGAGAAACTGGC
CGGCCTGCGTGAGAACGGCATTGCGTTCCCGAACGACTTCCGTCGCGACTCCACCTCCGACAAACTGCACGCCGCGTACG
GCGATAAAGACAACGAAGAGCTGGAAGCGCTGGGCGTAGAAGTGACCGTCGCCGGCCGCATGATGACCCGCCGCATTATG
GGCAAGGCATCCTTCGTTACGCTGCAGGACGTGGGCGGCCGCATTCAGCTGTACGTCGCGCGCGACGATCTGGCTGAAGG
CGTGTACAACGAGCAGTTCAAGAAGTGGGACCTGGGCGATATCCTCGGCGCGCGCGGCAAGCTGTTCAAAACCAAGACCG
GCGAACTGTCGATCCACTGCACCGAACTGCGTCTGCTGACCAAAGCGCTGCGCCCGCTGCCGGACAAATTCCACGGCCTG
GCGGATCAGGAAACCCGTTACCGCCAGCGTTACCTGGATCTGATCGCCAACGAAGAATCGCGCAACACCTTCAAGGTGCG
TTCGCAGGTGATGTCCGCTATCCGTAACTTCATGGTGGAACGCGGCTTCATGGAAGTCGAAACCCCGATGATGCAGGTGA
TCCCGGGCGGCGCGTCCGCGCGTCCGTTCATCACCCACCACAATGCGCTGGATATCGACATGTACCTGCGCATCGCGCCG
GAACTGTATCTGAAGCGTCTGGTGGTCGGCGGCTTCGAGCGCGTGTTCGAAATCAACCGCAACTTCCGCAACGAAGGCGT
TTCTCCGCGTCATAACCCAGAGTTCACCATGATGGAACTCTACATGGCTTACGCGGATTACAAAGATCTGATCGAGCTGA
CCGAGACCCTGTTCCGCACCCTGACCGAGAAAGTGCTGGGCACCTCTCAGGTGCAGTACGGCGACGAAGTGTTCGACTTC
GGCAAGCCGTTCGAGAAGTTGACCATGACCGAGGCGATCAAGAAATACCGTCCGGAAACCGATCTGGCTGACCTGGCCGA
CATGGGCAAAGCGGTGGCCATCGCTGAATCCATCGGCATCAAGGTTGAGAAGAGCTGGGGCCTGGGCCGCGTCGTGACCG
AGATCTTCGAAGAAGTGGCGGAAAGCCATCTGATTCAGCCGACCTTCATCACCGAGTACCCGGCTGAAGTGTCGCCGCTG
GCGCGCCGCAACGACGTGAACCCGGAAATCACCGACCGCTTCGAGTTCTTCATCGGCGGCCGTGAAATCGGCAACGGCTT
CTCCGAGCTGAACGACGCCGAAGACCAGGCGCAACGCTTCGCCGACCAGGTGAACGCCAAAGACGCCGGCGACGACGAAG
CGATGTTCTACGACGAAGACTACGTCACCGCGCTGGAGCACGGCCTGCCGCCGACCGCCGGTCTGGGCATCGGCATCGAC
CGCATGGTGATGCTGTTCACCAACAGCCACACCATCCGCGACGTGATTCTGTTCCCGGCGATGCGCCCACAGAAATAA

Protein sequence :
MSEQQVQGADQALDLNNELQSRREKLAGLRENGIAFPNDFRRDSTSDKLHAAYGDKDNEELEALGVEVTVAGRMMTRRIM
GKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDLGDILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
ADQETRYRQRYLDLIANEESRNTFKVRSQVMSAIRNFMVERGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTETLFRTLTEKVLGTSQVQYGDEVFDF
GKPFEKLTMTEAIKKYRPETDLADLADMGKAVAIAESIGIKVEKSWGLGRVVTEIFEEVAESHLIQPTFITEYPAEVSPL
ARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFADQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-163 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c39980 YP_007407804.1 lysyl-tRNA synthetase VFG1668 Protein 1e-163 68