|
Name : SMWW4_v1c38920 (SMWW4_v1c38920) Accession : YP_007407698.1 Strain : Serratia marcescens WW4 Genome accession: NC_020211 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : - COG ID : - EC number : - Position : 4198336 - 4200480 bp Length : 2145 bp Strand : - Note : - DNA sequence : ATGAATATCATCGCCATCATGGGCCCGACGGGCGTCTACTACAAAGATGAGCCGATTCGCGAGCTCCACGCTGCGCTGGC CGCCATGGGATTCCAGCTGGTGTACCCCAAAAACAGCGGTGATCTGCTGAAGCTGATCGAAGCCAACGCCCGCATCTGCG GGGTGATCTTCGACTGGGACGACTACAGCCTGGAGCTGTGCAGCGAGATCAACGAGCTGAACGAATACCTGCCGCTGTAC GCCTTTATCAATACCCACTCCACCTTCGACGTCAGCCTGCATGAAATGCGCATGGTGCTCTATTTCTTCGAGTACGGCCT GAACGCGGCGGACGACATCGCGCAGCGCATCCAGCAGTACACCGCGGAATATATCGACACCATCACGCCGCCGCTGACCA AGGCGCTGTTCAACTATGTGCGCGAAGGCAAGTACACTTTCTGCACGCCGGGCCACATGGCCGGCACTGCGTTTCAAAAA AGCCCGGTGGGCTGCCTGTTCTATGACTTCTTCGGCGCCAATACCCTGAAGGCCGACATCTCGATTTCGGTTACCGAGCT CGGTTCGCTGCTGGATCATACCGGGCCGCACCTGGAGGCCGAAGAGTATATCGCGCGCACCTTCAACGCCGAGCAGAGCT ATCTGGTCACCAACGGCACCTCCACCGCCAACAAGATCGTCGGCATGTATTCGGCGCCGGCGGGCAGCACGGTACTGATC GACCGCAACTGCCACAAATCGCTGTGCCACCTGCTGATGATGAGCGATATCGTGCCGATCTATCTGCGCCCGCTGCGCAA CGCCTACGGCATCCTCGGCGGGATCCCGCAGCGCGAATTCACGCGTGAGAGCATCGCCGCCCGGGTGCAGGCGACGCCGA ACGCCACCTGGCCGGTGCATGCGGTGATCACCAACTCCACCTATGACGGCCTGTTGTACAACACCGACTACATTAAGCAG ACGCTGGAGGTGCCGTCGATCCACTTCGACTCCGCCTGGGTGCCTTACACCAACTTCCATCCGATTTACGACGGCAAGAG CGGCATGAGCGGCGAGCGGGTGCCCGGCAAGGTTTTCTACGAAACCCAATCCACCCACAAGCTGCTGGCCGCCTTCTCGC AGGCCTCGATGATTCATATCAAGGGTGACTACGATGAGAGCACCTTCAACGAAGCCTACATGATGCACACCACCACTTCG CCGCACTACGGCATCGTGGCGTCGATGGAGACCGCCGCCGCCATGCTGCGCGGCAACCCGGGGCGCCGTTTGATCAACCG TTCGGTGGAACGCGCGCTGCATTTTCGCCGTGAAGTGCAGCGGCTGCGCGAGGAAAGCGACAGCTGGTTCTTCGATATCT GGCAGCCGGAAGAGATCGATGAGGCGCAGTGCTGGCCGCTGGATCCGGACGATAACTGGCACGGTTTCGGCCAGACCGAT CGCGATCATATGTACCTCGATCCGATCAAGGTGACGATCCTGACGCCGGGCATGAATGAGCTGAGCGCGCTGGAGGAAGA GGGGATCCCGGCGGCGCTGGTGGCGAAGTATCTCGACGAACGCGGCATCGTGGTGGAGAAGACCGGGCCGTACAACCTGC TGTTCCTGTTCAGCATCGGCATCGATAAAACCAAGGCGATGAGCCTGCTGCGCGGCCTGACCGACTTCAAGCGCGCCTAC GATCTCAACCTGCGGGTGAAGAACATGCTGCCGGATCTGTACGCCGAAGATCCGGATTTCTATCGCCATATGCGCATCCA GGATCTGGCCGCCGGCATTCATCGCCTGATCCGCCAACACGATCTGCCAGGCCTGATGCAGCGGGCGTTCGACGTGCTGC CGGAAATGAAGCTGACGCCGCACCAGATGTTCCAGGAGCAGGTGCGCGGCAATGTCGAAACCTGCGAGCTGGATCAGCTG GTGGGCAAGGTGGCGGCCAATATGATCCTGCCTTATCCGCCGGGCGTGCCGTTGGTGATGCCGGGGGAAATGATCACCGA AGAGAGCCGGGCGGTGCTCGATTTCCTGCTGATGCTATGCTCGATCGGTGAGCGCTATCCCGGTTTTGAAACCGATATCC ACGGCGCCAAACTGACGGAAGACGGGTGCTATCTGGTGAAGGTGCTGAAAGCCCCGCAGACATAA Protein sequence : MNIIAIMGPTGVYYKDEPIRELHAALAAMGFQLVYPKNSGDLLKLIEANARICGVIFDWDDYSLELCSEINELNEYLPLY AFINTHSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQYTAEYIDTITPPLTKALFNYVREGKYTFCTPGHMAGTAFQK SPVGCLFYDFFGANTLKADISISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPAGSTVLI DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQREFTRESIAARVQATPNATWPVHAVITNSTYDGLLYNTDYIKQ TLEVPSIHFDSAWVPYTNFHPIYDGKSGMSGERVPGKVFYETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTS PHYGIVASMETAAAMLRGNPGRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLDPDDNWHGFGQTD RDHMYLDPIKVTILTPGMNELSALEEEGIPAALVAKYLDERGIVVEKTGPYNLLFLFSIGIDKTKAMSLLRGLTDFKRAY DLNLRVKNMLPDLYAEDPDFYRHMRIQDLAAGIHRLIRQHDLPGLMQRAFDVLPEMKLTPHQMFQEQVRGNVETCELDQL VGKVAANMILPYPPGVPLVMPGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGCYLVKVLKAPQT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 75 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SMWW4_v1c38920 | YP_007407698.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 64 |
