Gene Information

Name : cadB (SMWW4_v1c38890)
Accession : YP_007407695.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : putative lysine/cadaverine transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4194479 - 4195822 bp
Length : 1344 bp
Strand : -
Note : -

DNA sequence :
ATGGCTTCACCCAAGAAAATAGGGCTTATTGCCTGCACCGGCGTGGTCGCCGGTAATATGATGGGGAGCGGGATTGCCTT
ATTGCCCGCCAACCTGGCGAGTCTCGGATCCATCGCCATTTGGGGATGGGTGATCTCGATTATCGGGGCGATGTCGCTGG
CTTATGTGTATGCCCGCCTCGCCACCAAAAACCCACAGCAGGGCGGCCCTATCGCCTACGCCGGTGAAATTTCCCCGGCT
TTCGGTTTCCAGACCGGCGTGCTTTATTACCATGCCAACTGGATCGGTAACCTGGCCATCGGCATTACCGCCGTTTCTTA
TCTCTCCACCTTCTTCCCGGCGCTGAACAACCCGGTGCCCGCCGGCATCGCCTGTATCGCCATCGTGTGGGTCTTCACCT
TCGTTAACATGCTGGGCGGAACCTGGGTCAGCCGTTTGACCACCCTGGGCCTGGTGCTGGTGCTGATCCCGGTGATCGTG
ACCGCCACCCTCGGCTGGCACTGGTTTGACGCCGCCACCTACCAGGCTAACTGGAATACCTCCGGCACCACCGACAGCCA
TGCGGTCATCAAAAGTATCCTGCTGTGCCTGTGGGCGTTCATCGGCGTGGAATCCGCGGCGGTCAGCACCGGCATGGTGA
AAAACCCGAAACGCACCGTACCGCTGGCGACCATGCTCGGCACCGGTCTGGCGGGCATCATCTACATCGCCGCCACCCAG
GTGATCAGCGGCATGTTCCCGGCGTCTGAAATGGCCGCCAGCGGCGCGCCGTTCGCCATCAGCGCCTCGGCGATTATGGG
CAACTGGGCCGCACCGATGGTTTCCGCCTTCACCGCCTTCGCCTGCCTGACCTCGCTCGGTTCGTGGATGATGCTGGTCG
GCCAGGCCGGGGTGCGCGCCGCCAACGACGGCAACTTCCCGAAAGTGTACGGCGAGCTGGATAAAAACGGCATTCCGAAG
AAAGGCCTGCTGCTGGCCGGTTGCAAAATGACCGCGCTGATGGTGCTGATCACCCTGATGAGCTCCGCCGGCGGCAAAGC
GTCCGACCTGTTCGGCGAGCTGACCGGTATCGCGGTGCTGCTGACCATGCTGCCTTACTTCTACTCCTGCGTAGACCTGA
TCCGCTTTGAAGGGGTCAACGTGCGCAACCTGCTGAGCCTGATCGCTTCCGTGTGCGGCTGCGGCTTCTGCTTCATCGCG
CTGATGGGCGCCAACTCTTTCGAACTGTCCGGCACCTTTATCATCAGCCTGATTATCCTGATGTTCTACGCCCGGAAAAT
GAATACCCGCCAGGCTGCCAGCGCAGCGGCGGTCGATGAAAACACCACGGCCAAAGCGCACTGA

Protein sequence :
MASPKKIGLIACTGVVAGNMMGSGIALLPANLASLGSIAIWGWVISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPA
FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPALNNPVPAGIACIAIVWVFTFVNMLGGTWVSRLTTLGLVLVLIPVIV
TATLGWHWFDAATYQANWNTSGTTDSHAVIKSILLCLWAFIGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQ
VISGMFPASEMAASGAPFAISASAIMGNWAAPMVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGELDKNGIPK
KGLLLAGCKMTALMVLITLMSSAGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGVNVRNLLSLIASVCGCGFCFIA
LMGANSFELSGTFIISLIILMFYARKMNTRQAASAAAVDENTTAKAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 5e-168 88
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 7e-168 88
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 2e-137 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB YP_007407695.1 putative lysine/cadaverine transporter VFG1671 Protein 1e-137 69