Gene Information

Name : fepD (SMWW4_v1c35410)
Accession : YP_007407350.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : iron-enterobactin ABC transporter permease FepD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3825437 - 3826492 bp
Length : 1056 bp
Strand : +
Note : -

DNA sequence :
GTGAACGTACCCACTCCGACTGAGCGGACGCTTTCGTCCGCACCGCACGCAGCTTACGCCAGTGGCTTCAAACGCATCGC
CGGGTTCGGTATCGGTTTGGCGCTGTTGCTGCTGTGCATCATGGCCAGCCTGATGCTGGGTTCCAAAGCCATCCCCTTCC
ATACCGTCTGGCTCAGCCTGCAGGGCGCCGCGAGCGGTTCCGACAGCACCATCATTCTCAATGCCCGGGTGCCCCGTACG
CTGGCGGGCATCCTGGCCGGCATGGCGCTCGGCGCCGCCGGCGCGCTGATTCAGGCGCTGACGCGCAACCCGCTGGCCGA
TCCCGGCGTGCTCGGCATCAACGCCGGCGCCAGCTTCGCCGTGGTCATCGGCATCATGTTTTTCGGCGCCGCCACCACCG
AAAGCTACATGGCCTACGCCTTTGCCGGCGCTGCCCTCACCACCCTGCTGGTCTACCTGATCGGCACGCTAGCGGGCGGG
CGCATCAACCCGGTGCGGCTGACGCTGGCCGGCGTGGCGATCGGCGCGGTGCTGCTCGGCATCACCACCGGGCTGTCGCT
GATCGATCCGCAAACCTTCGACCAACTGCGCTTCTGGCAGGCCGGCACGCTGGATATCCGCACGCTGTCCACGCTGCCGG
TCACCGCCCCCGCCATTTTGCTCGGCTGCCTGCTGACGCTGCTCATCGCCCGGCCGCTGAATACCATCGGCATGGGGGAA
GATCTGGCTATCGCACTCGGCGCGCGCGTGGTGCTGACTCAGGTGATCGCGGTGATCGCCATCACGCTGCTGTGCGGCGC
GGCGACCGCCACCGTCGGCCCGATCAGTTTCATCGGCCTGATGGTGCCGCATATCGCCCGCTGGTGGGTCGGCCCCGACC
AACGCTGGATCCTGCCCTACTCCATGCTGCTGGCGCCGATTTTACTGCTGTGCGCCGACGTGGTCGGCCGCTTGCTGGCG
GCCGGTGAACTGCGGGTTTCCATCGTGGCGGCCTTCATCGGCGCGCCGGTGCTGATCTGGCTGGTGCGCCGCAAGAAAAC
GCTGGGGGGTCTGTGA

Protein sequence :
MNVPTPTERTLSSAPHAAYASGFKRIAGFGIGLALLLLCIMASLMLGSKAIPFHTVWLSLQGAASGSDSTIILNARVPRT
LAGILAGMALGAAGALIQALTRNPLADPGVLGINAGASFAVVIGIMFFGAATTESYMAYAFAGAALTTLLVYLIGTLAGG
RINPVRLTLAGVAIGAVLLGITTGLSLIDPQTFDQLRFWQAGTLDIRTLSTLPVTAPAILLGCLLTLLIARPLNTIGMGE
DLAIALGARVVLTQVIAVIAITLLCGAATATVGPISFIGLMVPHIARWWVGPDQRWILPYSMLLAPILLLCADVVGRLLA
AGELRVSIVAAFIGAPVLIWLVRRKKTLGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 4e-37 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 4e-37 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 4e-37 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 4e-37 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_007407350.1 iron-enterobactin ABC transporter permease FepD VFG0926 Protein 4e-66 58