Gene Information

Name : SMWW4_v1c31980 (SMWW4_v1c31980)
Accession : YP_007407011.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3448976 - 3450634 bp
Length : 1659 bp
Strand : -
Note : -

DNA sequence :
ATGAGCATGCAAGCGGCATGGCAACGGGCGGCGCGGCCGCCGGTACTGGCGCTGGACAAGGTTTCCATCGCCTATCAGGG
CAACGAAGGCAGGCGAAGGGTGGTGCATGAGGTGTCGTTCACGATTGAGCCGGGGGAAGTGGTGGCGCTGGTTGGCGAAT
CCGGTTCCGGCAAAACCACCACGGCGCAGGCGATCATCGGCTTGCTGGCCGACAACGGCCACCTTGAACAGGGCGCCATT
CGGCTGCACGGCACCGATATCGCCGGCTGGTCATCGCGGCGGCTGGATGCGGTGAGAGGGGCGCAAATCAGCCTGATCCC
GCAAGATCCCGCCAGCTCGCTCAACCCGGTAAAAACCATCGGCGAGCAGGTGGCGGAGATCGTCAATATTCACCGCCGGT
TGCCGCGCGGGCAGGTACAACAGCGGGTGACGGAACTGCTGACCCGCGTCGGGCTGACGCACCCGGAACTGCGGGCGCGC
CAGTTTCCGCATCAACTTTCCGGCGGCATGAAGCAGCGGGTATTGATCGCCATCGCCATTGCGCTGCAGCCGGCGTTGAT
CATTGCCGACGAACCGAGCAGCGCGCTGGACGTGACGGTGCAAAAACGCATTCTCGATCTGATCGACGAGCTGCGGCGCG
AATTCGGCACTGCAGTGCTGCTGGTGACGCACGATTTGGGCGTGGCGGCGGAACGCGCCGATCGGCTGCTGGTGTTCCGC
CACGGCCGGGTGCAGGAACAGGGGGCTACCGCCGAGGTGCTGCGCGCGCCTGCCAGCGCATACACCCGTAAACTGTTAGC
CGATGCGCCTTCATTGAGCGGCGCCGTTGCGCCGCCGCCGAAACGCAGCGGGCAGCCGCCGGCGATCGTGGTTCAGGCGC
TGGTTAAGGATTTTCGGCTGTCCGGCGGCCAGGGGTTCCGCGCGCTGGATCGCGTGTCATTCAGCGTGCCGCGCGGCACC
ACCCATGCGTTGGTGGGAGAGTCCGGGTCGGGCAAAAGCACGCTGGCGCGTTGCCTGCTGGGTTTCGAGCGGCCGGATGC
CGGGCAGGTCCTGATCGACGGCGTCAATGTTATCGGTCTCAGGGGCGAAGCGCTGCGTCAGTTTCGGCAGCGCATTCAGC
TGGTTTATCAGAATCCGTTCGGCTCGCTCGATCCCAAACAGACTCTTTATCGGGTGATTGAAGAACCGCTGCTGAATTTC
GCGCCGATCGGCAAACCGGAGCGCGATCGGCGGGTGCGTGAGCTGTTCGAACGGGTCGCGCTGCCGCCCGATTTGCTGAA
CCGCAGGCCGCACGAACTGTCCGGCGGCCAGCGTCAGCGGGTGGCGATTGCCCGCGCGCTGGTGCTGCAACCGCGAATAT
TGGTATTGGATGAGGCCACGTCGGCGCTCGACGTCACGGTGCAGGCGCAGATCCTGCATTTGTTGCAAGAGTTGCAGCAG
GAGCGGGACCTGACCTACCTGTTTATTTCTCACGATCTGGCGACGGTGCGGCGGATTTCGCACAGCGTTTCGGTATTGCA
CCGCGGTGAGCGGGTAGACGGCGGCGCCACCGCCGAGTTGTTCGCCATGCCGGGGAGCGATTACACCCGCCAATTGATCG
CCGCCATTCCCGGCCGCGCATCGCATGCCGGACAGCCAAAATTCGAGGAGGCGATATGA

Protein sequence :
MSMQAAWQRAARPPVLALDKVSIAYQGNEGRRRVVHEVSFTIEPGEVVALVGESGSGKTTTAQAIIGLLADNGHLEQGAI
RLHGTDIAGWSSRRLDAVRGAQISLIPQDPASSLNPVKTIGEQVAEIVNIHRRLPRGQVQQRVTELLTRVGLTHPELRAR
QFPHQLSGGMKQRVLIAIAIALQPALIIADEPSSALDVTVQKRILDLIDELRREFGTAVLLVTHDLGVAAERADRLLVFR
HGRVQEQGATAEVLRAPASAYTRKLLADAPSLSGAVAPPPKRSGQPPAIVVQALVKDFRLSGGQGFRALDRVSFSVPRGT
THALVGESGSGKSTLARCLLGFERPDAGQVLIDGVNVIGLRGEALRQFRQRIQLVYQNPFGSLDPKQTLYRVIEEPLLNF
APIGKPERDRRVRELFERVALPPDLLNRRPHELSGGQRQRVAIARALVLQPRILVLDEATSALDVTVQAQILHLLQELQQ
ERDLTYLFISHDLATVRRISHSVSVLHRGERVDGGATAELFAMPGSDYTRQLIAAIPGRASHAGQPKFEEAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-107 49
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-70 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-70 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-70 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-70 41