Gene Information

Name : SMWW4_v1c31320 (SMWW4_v1c31320)
Accession : YP_007406945.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : chaperone protein FimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3372370 - 3373053 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTTTTAATCGCTACGGCGCCTTAGCGGCTCTCATTATTTTATTGTTTGCGTCTACGGTTCACGCCGGCGTGGTGAT
TGGCGGGACGCGGGTGATATTCAACGGCGAAAAAAAAGAAGCGTCAATCAGCGTGGAGAATCCGGATAAAGAACCGTATT
TGATTCAGTCCTGGCTGGATAATCAACAAAGCGGAGTGGATAAAATCGCGTTTATCGTTACGCCGCCTTTATTTCGGTTG
GACGGCAACCAGGAAAATATGCTGCGCATCGTGAAAGTGGGCGATGACTTACCGAAAGATAAAGAAAGCTTGTATTGGAT
GAATATTAAATCCATTCCTTCAACAACACAGACGGGTAAATCGAATACGCTGCAAATAGCGGTCAAGACCCGCATTAAAT
TGATTTATCGGCCGGCGCCGCTGCTCCGCCAGGTACCCGAAGAAGTGACGCAGCAGCTGAAATGGCAGCGTGTCGGTTCA
GAATTAAAACTCACCAACCCAACGCCTTATTATATGAACTTCCATTATGTCCGTATCGGGGGGCGGGAAATGAAAGAGGT
GGCATATATCGCGCCGATGAGCAGCGAAATGTTTGTATTGCCCGTGGCGGGCGCAACGTCGGTAAGCTGGAAATTAATTA
ATGATTATGGCGGCACAGGTAAAGAACATCAGTCAGGTATTTAA

Protein sequence : 
MRFNRYGALAALIILLFASTVHAGVVIGGTRVIFNGEKKEASISVENPDKEPYLIQSWLDNQQSGVDKIAFIVTPPLFRL
DGNQENMLRIVKVGDDLPKDKESLYWMNIKSIPSTTQTGKSNTLQIAVKTRIKLIYRPAPLLRQVPEEVTQQLKWQRVGS
ELKLTNPTPYYMNFHYVRIGGREMKEVAYIAPMSSEMFVLPVAGATSVSWKLINDYGGTGKEHQSGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-37 43
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 2e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c31320 YP_007406945.1 chaperone protein FimC VFG0875 Protein 3e-37 43
SMWW4_v1c31320 YP_007406945.1 chaperone protein FimC VFG0445 Protein 1e-37 41