Gene Information

Name : impB (SMWW4_v1c30140)
Accession : YP_007406827.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : type VI secretion system protein ImpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3252947 - 3253483 bp
Length : 537 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAAACTCGAAATCCCGCAGCGGGCAGAAATTCATCGCCCGCAACCGCGCGCCGCGCGTACAGATTGAATACGATGT
CGAAATTTATGGCGCAGAGCGCAAAATCCAGCTGCCGTTCGTGATGGGCGTGATGGCGGATCTGGTGGGGAAAGCGGTCG
ATCCGCAAGCCAGCGTGGAAGAGCGCAAGTTCATGGAAATCGACGTCGACAACTTCGACGAGCGCATGAAATCGCTGAAG
CCGCGCGTCGCTTATCAGGTTGACAATACCCTGACCGGCGAAGGCAAGCTGAACATCGATCTGACCTTCGAAAGCATGGA
AGACTTCTCCCCCGCCGCTATCGCCCGCAAGGTCGACGCGCTGGACAATCTGCTGGACGCCCGCACCCAGCTTTCCAACC
TGCTGTCCTACATGGACGGTAAAAACGGCGCCGAGGAGCTGATCTCCAAGATCCTGCAAAACCCGGCGCTGCTGAAATCC
CTGACCGACGCGCCGAAGCCGGCGGTTAACGATGACAACAACGAGCGTGAGGATTAA

Protein sequence : 
MSNSKSRSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVMADLVGKAVDPQASVEERKFMEIDVDNFDERMKSLK
PRVAYQVDNTLTGEGKLNIDLTFESMEDFSPAAIARKVDALDNLLDARTQLSNLLSYMDGKNGAEELISKILQNPALLKS
LTDAPKPAVNDDNNERED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-57 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
impB YP_007406827.1 type VI secretion system protein ImpB VFG2069 Protein 3e-61 72