Gene Information

Name : SMWW4_v1c29190 (SMWW4_v1c29190)
Accession : YP_007406732.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Unknown
Product : phage portal protein, PBSX family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3158347 - 3159315 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence :
ATGCAGGCGTTCACCTTTGGTGAGCCGTCGGCCGTATTGGATCGCCGTGACATTTTGGACTACACGGAATGCGTCGGTAA
CGGTAAATGGATTGAGCCGCCCGTCAGCTTTTCCGGGCTGGCAAAAAGCCTGCGCGCCGCCGTGCATCACAGCTCACCCA
TTTACGTGAAGCGCAATATTTTGGCGAGCACCTACATCCCGCACCCACTGCTATCACAGCAGGATTTCAGCCGGTTTGTG
CTGGATTATCTGGTGTTCGGCAACGCCTTTTTAGAAAAGCGTTTCAGCGTGACCGGCAAGCTGTTGAAGCTGGAGACCTC
CCCGGCCAAATACACCCGGCGCGGCGTTGACCCGAGCGTTTACTGGTTCGTGCAATCGTTCGCTGAGCCGCACCCGTTCG
CGCCCGACAGCGTTTTTCACCTGCTGGAGCCGGATATCAATCAAGAGCTGTATGGGATGCCGGAATATCTGTCGGCGCTC
AACTCCGCGTGGCTGAACGAGTCCGCCACGCTGTTCCGCCGCAAGTATTATCAGAACGGCGCACACGCGGGCTATATCAT
GTATGTCACCGACGCAGCGCAAAACAATACCGATGTTGAGGCGTTGCGCGAAGCGATGAGCGACTCTAAAGGCATGGGGA
ACTTTAAAAACCTGTTCTTCTACGCACCGAACGGGAAGCCCGACGGTATCAAGATTGTGCCACTCAGCGAAGTGGCAACG
AAGGATGATTTCTTCAACATCAAAAAGGTCAGCGCCGCCGACCTGCTGGACGCCCACCGCATCCCCTACCAGCTGATGGG
CGGCAAACCGGAGAACGTCGGGTCAGTAGGTGACGTGGAAAAGGCCGCAAAGGTGTTTGTCCGCAATGAGCTGACACCGC
TCCAGCAGCGCATCAAAGAAGTGAATGACTGGGTCGGCGTCGAGGTCATCCGGTTTAAAAAGTACAACCTCGAAAACGAC
GACGAATGA

Protein sequence :
MQAFTFGEPSAVLDRRDILDYTECVGNGKWIEPPVSFSGLAKSLRAAVHHSSPIYVKRNILASTYIPHPLLSQQDFSRFV
LDYLVFGNAFLEKRFSVTGKLLKLETSPAKYTRRGVDPSVYWFVQSFAEPHPFAPDSVFHLLEPDINQELYGMPEYLSAL
NSAWLNESATLFRRKYYQNGAHAGYIMYVTDAAQNNTDVEALREAMSDSKGMGNFKNLFFYAPNGKPDGIKIVPLSEVAT
KDDFFNIKKVSAADLLDAHRIPYQLMGGKPENVGSVGDVEKAAKVFVRNELTPLQQRIKEVNDWVGVEVIRFKKYNLEND
DE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 2e-106 66
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 2e-106 66
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 2e-74 52