Gene Information

Name : SMWW4_v1c28500 (SMWW4_v1c28500)
Accession : YP_007406664.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3081033 - 3081419 bp
Length : 387 bp
Strand : +
Note : -

DNA sequence :

ATGATACAAGAACACCACCTCTCGTTGGTCTGCGCCCTCAGCAAATGGGTCGAAACTCACCTCGGACGAGTGATCCATCT
CGAAGAGCTGGCCGAGTACTCCGGCTACTCGCTGTGGCACATGCAGAAGCTGTTCAAAGAAGCGACAGGGATTTCGCTCG
GTAAATACATTCGCGAACGCCGTCTGGCCGGCGCGGTCTATCAACTGCGCAGCAGTGAAGCGTCGATCTTCGACATCGCC
CTGGACTTTGGCTTCGGTTCACAGTCCCACTTCACCTACATGTTCAGAAAGCGTTTTAATATCACACCCTATGATTTCCG
CCAGGATTTGAGCGTTGATCTGCACATCGATCCGCCGTTGCACGTCATTCACCAAAAATCCGCCTGA

Protein sequence :

MIQEHHLSLVCALSKWVETHLGRVIHLEELAEYSGYSLWHMQKLFKEATGISLGKYIRERRLAGAVYQLRSSEASIFDIA
LDFGFGSQSHFTYMFRKRFNITPYDFRQDLSVDLHIDPPLHVIHQKSA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
soxS	YP_219131.1	DNA-binding transcriptional regulator SoxS	Not tested	SPI-4	Protein	2e-19	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SMWW4_v1c28500	YP_007406664.1	AraC family transcriptional regulator	CP001918.1.gene2033.	Protein	4e-16	42
SMWW4_v1c28500	YP_007406664.1	AraC family transcriptional regulator	BAC0371	Protein	6e-20	41
SMWW4_v1c28500	YP_007406664.1	AraC family transcriptional regulator	CP000034.1.gene4505.	Protein	1e-19	41
SMWW4_v1c28500	YP_007406664.1	AraC family transcriptional regulator	NC_002695.1.914293.p	Protein	6e-20	41
SMWW4_v1c28500	YP_007406664.1	AraC family transcriptional regulator	CP001138.1.gene4488.	Protein	8e-20	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SMWW4_v1c28500	YP_007406664.1	AraC family transcriptional regulator	VFG0585	Protein	7e-20	41