Gene Information

Name : tpx (SMWW4_v1c26010)
Accession : YP_007406417.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : lipid hydroperoxide peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2823772 - 2824275 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGACTCAGACAGTACATTTTCAAGGCAATCCGGTCAGCGTAGCGGGCAAACTGCCACAGCAGGGCGAACAGGCCAAGGC
CTTCTCGCTGGTTGCCAAAGACCTGTCAGACGTAGCGCTGAGCAGCTTCGCGGGTAAACGCAAAGTCCTGAACATCTTCC
CAAGCATCGATACCGGCGTCTGCGCGACGTCGGTGCGTAAATTCAACCAGTTGGCCAGCGGCCTGGATAACACCGTGGTG
CTGTGCATCTCCGCCGATCTGCCGTTCGCGCAGTCGCGTTTCTGCGGCGCGGAAGGCCTGAGCAACGTGGTTACCCTGTC
TACCCTGCGCGGCGCCGAGTTCAAGCAGGCGTACGGCGTTGAAATCGCCGAAGGTCCATTGGCAGGCCTGACCGCGCGTG
CGGTCGTGGTGCTGGATGGCCAGGACAACGTGCTGTACAGCGAGCTGGTGAACGAAATCACCACCGAGCCGGATTACGAC
GCGGCGCTGGCAGCGCTGAAATAA

Protein sequence : 
MTQTVHFQGNPVSVAGKLPQQGEQAKAFSLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCATSVRKFNQLASGLDNTVV
LCISADLPFAQSRFCGAEGLSNVVTLSTLRGAEFKQAYGVEIAEGPLAGLTARAVVVLDGQDNVLYSELVNEITTEPDYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-34 49
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 9e-35 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-34 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-35 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_007406417.1 lipid hydroperoxide peroxidase VFG0087 Protein 3e-35 49