Gene Information

Name : aldB (SMWW4_v1c23970)
Accession : YP_007406217.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2584480 - 2586000 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
ATGAAATATGTCCACCCCGGTTTGCCTGGCTCGCTGGTTTCGTTCCGCAAACGCTATGGCAACTACATTGGCGGCAAATT
CGTCGAACCGGTATCCGGCAACTACTTCACCAACACCTCGCCGGTGACCGGCCAGCCGATCGCCGAATTCCCGCGTTCCG
ACGCCAAAGACATCGAGCTGGCGCTTGACGCGGCGCATGCGGCGGCGGACGCCTGGGGTAAAACCAGCGTGCAGGAGCGT
TCCAACGTGCTGCTGGCGATCGCCGATCGCATCGAATCGCGGCTGGAGATGCTGGCGCTGACCGAAACCTGGGACAACGG
CAAACCGATCCGCGAAACCCTGAATGCCGATCTGCCGTTGGCGGTCGACCATTTCCGTTACTTTGCCGGTTGCCTGCGCG
CGCAGGAAGGCACCGCGGCGGAGATCGACCAGAACACCGTGGCCTACCATATCTATGAACCGCTGGGCGTGGTCGGCCAG
ATCATTCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAACTGGCGCCGGCGCTGGCGGGCGGTAACTGCGTGGTGCT
GAAACCGGCGGAACAAACGCCGCTCGGCATCAGCGTGCTGATGGAAGAGATCGGCGATCTGCTGCCGCCGGGCGTGCTCA
ACGTGGTACAAGGTTTCGGCGCCGAGGCCGGCGAAGCGCTGGCGCGCAGCAAACGCATCGAAAAAATCGCCTTCACCGGC
TCCACGCCGGTCGGCCGCCACATCCTCGCCTGTGCGGCGGAGAACATCATCCCCAGCACCGTCGAGCTGGGCGGCAAATC
GCCCAACATTTATTTTGAAGACATCATGCAGGCGGAACCGGAGTTTATCGACAAAGCGGTTGAGGGGCTGGTGCTGGGCT
TCTTCAACCAGGGGGAGGTGTGCACCTGCCCTTCACGCGCGCTGATCCAGGAATCCATCTACCCGCAGTTTATGGAGAAA
GTGCTGGCGCGTATCGCTACCATCCGCCAGGGCGATCCCTTCGACACCGAGACCATGATCGGCGCCCAGGCGTCAAAACA
GCAGTACGACAAGATCCTGTCCTATATCGAGATCGCTAAAAACGAGGGAGGCAAAATCGTTGCGGGCGGCGAGCCCGCCC
AGCGCGGCGACGAAGTGCAAAACGGTTTCTACCTGCAGCCGACGCTGATTACCGGCAACAACAGCATGCGTTTCTTCCGC
GAGGAGATCTTCGGGCCGGTGATTGGCGTCACCACCTTTAAGGATGAGGCCGAAGCCCTGGCGCTGGCCAACGACACCGA
GTTTGGGCTGGGCGCCGGGCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGCGATCAAGGCCGGGCGCG
TGTGGACCAACTGCTATCACCTGTACCCGGCGCACGCCGCGTTCGGCGGCTACAAGAACTCCGGCATCGGACGCGAAACC
CACAAGGCGGCGCTGTCGCACTATCAACAGGTGAAAAACCTGCTGGTCAGCTACGACGCCAAGCCGCTGGGCCTGTTCTG
A

Protein sequence :
MKYVHPGLPGSLVSFRKRYGNYIGGKFVEPVSGNYFTNTSPVTGQPIAEFPRSDAKDIELALDAAHAAADAWGKTSVQER
SNVLLAIADRIESRLEMLALTETWDNGKPIRETLNADLPLAVDHFRYFAGCLRAQEGTAAEIDQNTVAYHIYEPLGVVGQ
IIPWNFPLLMAAWKLAPALAGGNCVVLKPAEQTPLGISVLMEEIGDLLPPGVLNVVQGFGAEAGEALARSKRIEKIAFTG
STPVGRHILACAAENIIPSTVELGGKSPNIYFEDIMQAEPEFIDKAVEGLVLGFFNQGEVCTCPSRALIQESIYPQFMEK
VLARIATIRQGDPFDTETMIGAQASKQQYDKILSYIEIAKNEGGKIVAGGEPAQRGDEVQNGFYLQPTLITGNNSMRFFR
EEIFGPVIGVTTFKDEAEALALANDTEFGLGAGLWTRDINRAYRMGRAIKAGRVWTNCYHLYPAHAAFGGYKNSGIGRET
HKAALSHYQQVKNLLVSYDAKPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-159 67
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-165 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-165 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-165 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-164 66
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_007406217.1 aldehyde dehydrogenase B VFG0082 Protein 5e-160 67