Gene Information

Name : SMWW4_v1c21570 (SMWW4_v1c21570)
Accession : YP_007405977.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : putative ATP-binding protein of chelated iron ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2333969 - 2334859 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCATGAACCGTTTGTCCGCCCTGAATTGAACGTGGACGACGTCACCGTAACCTACAACAACGGGCACACCGCCAT
TCACAACGCCAGCTTCACCCTGAGCGGCGGTTCGATCTGCGCGCTGGTCGGCGTCAACGGCAGCGGCAAGTCGACGCTGT
TCAAAAGCATCATGGGCCTGGTCAGGCCCACCGCCGGCCAGGTGTCGCTGAGCGACAAGCCGGTGGCGGACGCGCTGAAA
AAGAACCTGATCGCCTACGTGCCGCAGACCGAAGACGTCGACTGGAACTTCCCGGTGCTGGTGGAAGACGTGGTGATGAT
GGGCCGCTACGGCAAGATGAACTTCCTGCGCATTCCGTCACGTGAGGACAGGTTGCGGGTCGACAAGGCGCTGGAGCGCG
TCGGCCTGAGCGAGCTGCGCGGCCGGCAGATCGGCGAGCTGTCCGGCGGCCAGAAGAAGCGCGTATTTCTGGCGCGCGCG
CTGGCGCAACAGGGCACGGTGCTGCTGCTGGATGAGCCTTTCACCGGCGTGGATGTGAAAACCGAGAATGCGATTATCGA
GCTGCTGCGCGCGCTGCGCGACGAGGGCCATCTCATTTTGGTCTCCACCCACAACCTCGGCAGCGTGCCGGAATTTTGCG
ATCGGGTGATCCTCATCAACCGCACGGTGCTGGCCGCCGGCCCGACCGAGACCACCTTCACACAGAGCAACCTGGAGCAG
GCGTTCGGCGGCGTGCTGCGCCATATCAACCTTTCCGGCCCGGATCTGCACGACGACAACGATCCGCGCACCGTCACGGT
GTTGACCGACGATGAACGCCCGGCGGTGTTCTACGGCCACACCAAAAGCGATCCGCCGGCCAACAGCCAGGCCAGGGAGA
AACAATCCTGA

Protein sequence : 
MTHEPFVRPELNVDDVTVTYNNGHTAIHNASFTLSGGSICALVGVNGSGKSTLFKSIMGLVRPTAGQVSLSDKPVADALK
KNLIAYVPQTEDVDWNFPVLVEDVVMMGRYGKMNFLRIPSREDRLRVDKALERVGLSELRGRQIGELSGGQKKRVFLARA
LAQQGTVLLLDEPFTGVDVKTENAIIELLRALRDEGHLILVSTHNLGSVPEFCDRVILINRTVLAAGPTETTFTQSNLEQ
AFGGVLRHINLSGPDLHDDNDPRTVTVLTDDERPAVFYGHTKSDPPANSQAREKQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-84 67
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-83 67
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-83 67
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-83 67
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-84 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c21570 YP_007405977.1 putative ATP-binding protein of chelated iron ABC transporter BAC0440 Protein 2e-123 84
SMWW4_v1c21570 YP_007405977.1 putative ATP-binding protein of chelated iron ABC transporter BAC0350 Protein 3e-84 67
SMWW4_v1c21570 YP_007405977.1 putative ATP-binding protein of chelated iron ABC transporter BAC0400 Protein 7e-47 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c21570 YP_007405977.1 putative ATP-binding protein of chelated iron ABC transporter VFG0526 Protein 3e-84 67