|
Name : kdsB (SMWW4_v1c17020) Accession : YP_007405525.1 Strain : Serratia marcescens WW4 Genome accession: NC_020211 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : - Position : 1876278 - 1877027 bp Length : 750 bp Strand : + Note : - DNA sequence : ATGAGTTTTATCGCTATTATTCCCGCCCGCTATGCCTCAACCCGTTTGCCGGGCAAACCGCTGGCCGATATTCACGGCAA GCCGATGGTGGTGCATGTGATGGAGCGCGCCCGTGAGTCCGGCGCTAGCCGCGTCATCGTGGCGACCGATCATCCTGAAG TCGCCAAAGCGGTGGAAGCCGCCGGCGGCGAAGTGTGCATGACCAGCCCGGATCACCATTCCGGCACCGAGCGTCTGGCG GAAGTGATCGCGCACTACGGCTTTGCCGACGACCAGATCATCGTTAACGTGCAGGGCGATGAGCCGCTGATCCCACCCGT TATCGTGCGGCAGGTGGCGGAAAACCTGGCGGGCAGCCAGGCCGGCATGGCGACGTTGGCGGTGCCGATCGAGAGCGCCG AAGAGGCTTTCAACCCCAATGCGGTGAAGGTGGTGATGGACGCGCAGGGCTACGCGCTCTATTTCTCACGCGCCACCATT CCGTGGGATCGCGAGCGTTTCGCCGCGTCGAAAGAGAGCATCGGCGACAGCCTGCTGCGTCATATCGGCATCTACGCATA CCGCGCGGGCTTCGTGCGCCGCTACGTCAGCTGGGCGCCGAGCCAACTGGAGCAGATCGAGCTGTTGGAACAGCTGCGCG TGCTGTGGTACGGTGAAAAGATCCACGTGGCGGTCGCGAAAGCGATCCCGAGCGTGGGGGTCGATACGCCGGAAGACCTC CAGCGCGTGCGCGACAGCATTCAACCCTGA Protein sequence : MSFIAIIPARYASTRLPGKPLADIHGKPMVVHVMERARESGASRVIVATDHPEVAKAVEAAGGEVCMTSPDHHSGTERLA EVIAHYGFADDQIIVNVQGDEPLIPPVIVRQVAENLAGSQAGMATLAVPIESAEEAFNPNAVKVVMDAQGYALYFSRATI PWDRERFAASKESIGDSLLRHIGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAIPSVGVDTPEDL QRVRDSIQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-27 | 47 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-27 | 47 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 6e-28 | 46 |
