Gene Information

Name : SMWW4_v1c16170 (SMWW4_v1c16170)
Accession : YP_007405440.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : fimbrial protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1779542 - 1780063 bp
Length : 522 bp
Strand : +
Note : -

DNA sequence :
ATGAAACTTAACAAAATCATGATGGCTGCAGTGATTGCATTTGGCGCAAGTTCTTTTGCACAGGCAGCCGATCAGGGACA
CGGTAAAGTGACCTTCACGGGTTCTATTATTGATGCGCCATGCTCTATTGCACCCGAGTCGATCGATCAGACCGTAGATC
TGGGCCAGGTTTCTAACGTGGCGTTGAAAAACGGCGGCAAATCCAACCCGCGTCCGTTTGAAATCAAGCTGGAGCAGTGT
GATACCACTACGCTGAAAACCGTTAAAACCACCTTCAGCGGCATTGCGTCGTCAACCAACAAAGATCTGTTGGGTATCGC
GGGGACCGCCAGCGGCGCCGGCGTAGCAATCACTTATGGCGGCCAGCCGATCAAACTGGGTCAGGCGACTGCGGCACAGA
CGCTGAATACTGGCAACAACAGCCTGAACTTCGCCGCTTACCTGCAGGGTGAAGGCGCCTCCGCAGCCATCGTTCCGGGC
GATTTCACCGCCGTAGCCGACTTCACTCTGGCTTATCAGTAA

Protein sequence :
MKLNKIMMAAVIAFGASSFAQAADQGHGKVTFTGSIIDAPCSIAPESIDQTVDLGQVSNVALKNGGKSNPRPFEIKLEQC
DTTTLKTVKTTFSGIASSTNKDLLGIAGTASGAGVAITYGGQPIKLGQATAAQTLNTGNNSLNFAAYLQGEGASAAIVPG
DFTAVADFTLAYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixA CAE85161.1 PixA protein Not tested PAI V 536 Protein 6e-26 43
papA YP_002414017.1 P-fimbriae major subunit Not tested Not named Protein 1e-25 42
papA NP_755467.1 PapA protein Virulence PAI I CFT073 Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c16170 YP_007405440.1 fimbrial protein VFG0882 Protein 5e-25 41