Gene Information

Name : SMWW4_v1c15050 (SMWW4_v1c15050)
Accession : YP_007405328.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1646513 - 1646971 bp
Length : 459 bp
Strand : -
Note : -

DNA sequence : 
ATGGATCGCGTCAATATCATTCACGATTTACTAGACTGGATTGAAACTCATCTGGATCAGCCGCTGCTGCTGGACAACGT
CGCCGCCAAGTCGGGCTACTCCAAATGGCACCTGCAGCGCATGTTCCGCAGCACCACCGGCCACGCGCTCGGCAGCTATA
TCCGCGAGCGGCGTCTTTCGCAGGCGGCGCAGGCGCTGCGCTCCACTCCACGACCGATCCTGGATATCGCCCTGCAATAC
CATTTCGACTCTCAGCCTTCGTTCTCGCGTGCCTTCAAGAAACAGTTCGGCAAAACCCCGGCGGTCTATCGCCGCACCAC
CCGCTGGGACGTCGCAGAATGGCCGGCGCAGCCGATAGAAATGCAGGCCGAACCGCGCCACGATGCCCCCACGCTGCCCC
GCTGGTACGCCGGCAAGCCGCCGGAAGGCGTTTGCACCAGCTGGATGGGGCTGCGTTAA

Protein sequence : 
MDRVNIIHDLLDWIETHLDQPLLLDNVAAKSGYSKWHLQRMFRSTTGHALGSYIRERRLSQAAQALRSTPRPILDIALQY
HFDSQPSFSRAFKKQFGKTPAVYRRTTRWDVAEWPAQPIEMQAEPRHDAPTLPRWYAGKPPEGVCTSWMGLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-28 55
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-28 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c15050 YP_007405328.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 6e-29 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c15050 YP_007405328.1 AraC family transcriptional regulator VFG1038 Protein 6e-29 55