Gene Information

Name : SMWW4_v1c12670 (SMWW4_v1c12670)
Accession : YP_007405090.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1408182 - 1408970 bp
Length : 789 bp
Strand : +
Note : -

DNA sequence : 
ATGACGATTGAAAAAGCGCGATCCGGCCTGTGCGCCGAGGCGGTGAGCTGGCGAGCGGGCGCACGCACGGTGCTGGAAAA
TCTCAGTTTCTGCGCCTTGCCCGGTGAGGTCACCGGCGTGCTCGGCGTCAACGGCAGCGGTAAATCCACGCTGCTCAAGC
TGCTGGCCGGGCTGCAGCCCGCCGCCGGGGGCCGCGTTTGGCTGGAAGGGCGCGAAATTACCGCGTTTTCCGGGCGGGAG
CGCGCCAGGCGCATCGCCTTTCTCGAGCAATCCGCCCCCGGCGCCTTCGCGCTGCCGGTGAAGGAGGCGGTGCTGCTGGG
GCGCCTGGCCCATACCGGCCGCTGGCGCGGTTTCGGCGCCGAGGATCGCCGCCTCGCCGGGCAGGCGATGGAGCAAGTGG
GCATCAGCCACCTGGCCGATCGCGATTGGCAGCGGCTGTCCGGCGGCGAACGGCAGCGGGTGCATCTGGCGCGCGCGCTG
GCGCAGCAAACGCCGTGGCTGCTGCTGGACGAGCCCGCCAATCATCTGGATATCGCCCATCAACAGCAGTTTATGGCCTT
GCTGCGGCGGCTGAAACTCAGCGTGGTGGTGACGCTGCACGATCTTAATCTGGCGGCCTGTTATTGCGATCGGATCGCGC
TGCTGCAGCGGGGCGGGATCTGTGCGGCGGGCGCGCCGCGGCAGGCGCTGACGCCGGAGAACATTCGCGCGGTATACGGT
GTGGAGGCCAGGCTGGCGGCGCCCGCCGGCTATGCGCCGCCGTTGATCTATTACCCCGCGCCGGGATGA

Protein sequence : 
MTIEKARSGLCAEAVSWRAGARTVLENLSFCALPGEVTGVLGVNGSGKSTLLKLLAGLQPAAGGRVWLEGREITAFSGRE
RARRIAFLEQSAPGAFALPVKEAVLLGRLAHTGRWRGFGAEDRRLAGQAMEQVGISHLADRDWQRLSGGERQRVHLARAL
AQQTPWLLLDEPANHLDIAHQQQFMALLRRLKLSVVVTLHDLNLAACYCDRIALLQRGGICAAGAPRQALTPENIRAVYG
VEARLAAPAGYAPPLIYYPAPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-35 44
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 7e-29 41
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 4e-29 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 4e-29 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 5e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c12670 YP_007405090.1 ABC transporter, ATP-binding protein VFG0925 Protein 2e-31 41