Gene Information

Name : SMWW4_v1c12150 (SMWW4_v1c12150)
Accession : YP_007405038.1
Strain : Serratia marcescens WW4
Genome accession: NC_020211
Putative virulence/resistance : Virulence
Product : hypothetical protein, DUF1722 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1349293 - 1350249 bp
Length : 957 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGACAAGATCCCTATCGGCATCAGCGCCTGTTTACTGGGCGACGCGGTGCGTTTCGACGGTGGCCACAAGCGGCT
GGCCTTCGCGGTGGAACAGTTGGCGCCCTATGTGCGCTTTGAGCCCGTATGCCCGGAAATGGCGATCGGCCTGCCCACGC
CGCGCCCGGCGCTGCGCCTGGTGAAACAGGCGCAGCCCTGGCCGGCGATGCGCTACAGCAACGACGCCGGCGTGGATCTG
ACCGAGGAGATGCGCAGTTTCTCCGCGCAGCGCGTGGCCGCGTTGCAGCACCTGTGCGGTTATATCGTCTGCGCCAAGTC
GCCGAGCTGCGGCCTGGAGCGGGTGCGGGTCTACAGTGAGAACGGCAAGGACTCGCGTAAAAACGGCGTCGGGCTGTTTA
CCGCCGAACTGCTGCGTCAGATGCCGTGGCTGCCGGTGGAAGAAGACGGACGATTGCAGGATGCGGCATTGCGGGAAAAC
TTCATTGAACGGGTGTACGCGCTGTATGAGTTGAATATGCTGTGGCGCCAGGGGCTGACCCGCGGCGGGCTGATCGCGTT
TCACAGCCGCTACAAGCTGTCGCTGCTGGCGCATTCGCAGCCGGCGTACCGCGAACTGGGGCGTTTCGTCGCCGACATTC
ATCGCTGGGACTCGCTGGAGGCCTTCGCCGTGGAATATCGCAGCCGCCTGATGGCGCTGTTGGCGCACAAGGCGACGCGC
CGCAACCATACCAACGTGCTGATGCACGTGCAGGGGTACTTCCGCCGCCAGCTCAGCGCGGCGCAGCGCCAGGAGCTGGC
GCACCTGATCGACCGCTACCGGCAGGGCATGCAGCCGCTGCTGGCGCCGATCGCCTTGCTTAAGCATTACATGGCGGAAT
ACCCCGACAGTTATCTGGCGGAACAACGCTATTTCGAACCTTATCCGGAGGCGCTGCGTTTGCGTTACGGCCATTGA

Protein sequence : 
MSDKIPIGISACLLGDAVRFDGGHKRLAFAVEQLAPYVRFEPVCPEMAIGLPTPRPALRLVKQAQPWPAMRYSNDAGVDL
TEEMRSFSAQRVAALQHLCGYIVCAKSPSCGLERVRVYSENGKDSRKNGVGLFTAELLRQMPWLPVEEDGRLQDAALREN
FIERVYALYELNMLWRQGLTRGGLIAFHSRYKLSLLAHSQPAYRELGRFVADIHRWDSLEAFAVEYRSRLMALLAHKATR
RNHTNVLMHVQGYFRRQLSAAQRQELAHLIDRYRQGMQPLLAPIALLKHYMAEYPDSYLAEQRYFEPYPEALRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 4e-96 60
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 4e-96 60
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-96 60
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 5e-96 60
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 4e-96 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMWW4_v1c12150 YP_007405038.1 hypothetical protein, DUF1722 family VFG0490 Protein 2e-96 60