Gene Information

Name : GHH_c09470 (GHH_c09470)
Accession : YP_007401237.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 922332 - 923084 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGAAGATGGATTTAAAAGAGATTTGTAAAGCCCTGCATTTGGCGTACATCGCGGATCGATTCGAGGAGGTGGCCTACGA
GACCAAGGAACAGTTTTTACGTGATGTGTTGGCGTTGGAGCTGTCGTTCCGTCAGAAAGCAAAACAGGCTCGATTGATCA
AGAAGGCGAAGTTCCGGGAGTTGAAATGGCTCAAAGATTACGAATGGTCGGATCAGATTCATTGGCCGACCACGACCTCG
AAGGAAGAACTTTGCGACCTTTGCTTTTTGGAGCAAAAACAGAACGTCCTGCTTTTAGGTTCGCCGGGAACAGGAAAAAC
CCATCTCGCCACCGCATTAGGATTAAAAGCGTGTGAACGGGGCCATGAAGTTCGGTTTTTCCGTGTCGCCGATCTTGTCG
CCCAGCTCGAAGAGGCGTTAAAAGACGGCATCCTCGGACGGCTCAAACGGCAAATCGACACATGCGAGTTGTTGATTTTG
GACGAACTCGGCTATGTACCTTTTCAAAAGCAGGGATCGGAACTGCTGTTTCACATCATTGCCGATTGTTATGAACGAAA
AAGTGTCATCGTGACATCGAATTTAGAGTTTGGACAGTGGAATCGAGTGTTTGGGGACAACCGCCTGACGGCAGCGCTGG
TGGATCGTTTGGTCCATCACGCCCACATTCTCGCGTTTACGGGAGAGAGCTACCGCTTGCGGCACGCGCTTTCTGCCGTT
CAGTCGCTCCCTTCTCACTCGGTTGAAAGGTAA

Protein sequence :
MKMDLKEICKALHLAYIADRFEEVAYETKEQFLRDVLALELSFRQKAKQARLIKKAKFRELKWLKDYEWSDQIHWPTTTS
KEELCDLCFLEQKQNVLLLGSPGTGKTHLATALGLKACERGHEVRFFRVADLVAQLEEALKDGILGRLKRQIDTCELLIL
DELGYVPFQKQGSELLFHIIADCYERKSVIVTSNLEFGQWNRVFGDNRLTAALVDRLVHHAHILAFTGESYRLRHALSAV
QSLPSHSVER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 2e-37 47
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 6e-38 44
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-36 42
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 8e-33 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-36 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-36 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 4e-36 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-36 41
unnamed CAA21402.1 - Not tested HPI Protein 4e-36 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-36 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-36 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-36 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 4e-36 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 4e-36 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GHH_c09470 YP_007401237.1 putative transposase VFG1663 Protein 7e-37 42
GHH_c09470 YP_007401237.1 putative transposase VFG1460 Protein 5e-33 41
GHH_c09470 YP_007401237.1 putative transposase VFG1515 Protein 2e-36 41
GHH_c09470 YP_007401237.1 putative transposase VFG1627 Protein 2e-36 41
GHH_c09470 YP_007401237.1 putative transposase VFG1606 Protein 2e-36 41