Gene Information

Name : metC (GHH_c08100)
Accession : YP_007401101.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 782424 - 783605 bp
Length : 1182 bp
Strand : +
Note : -

DNA sequence :
ATGGAACGGGAATGGTCGTTTTCAACGAAACTGCTCCATAATGAATGGAAAGTCGATCGCCACACGGGAGCGGTGAGCGT
GCCGATCCAGCATGCCTCCACGTTCCATCAGTTCGATTTCGATTCATTCGGCAAATACGACTACAGCCGCTCCGGCAACC
CGACGCGCGAGGCGCTCGAGGAAACGATCGCGGCGTTAGAAGGCGGCGTGCGCGGATTCGCCTTCGCTTCTGGCATGGCG
GCCATTTCGACGGCGTTTTTGCTCTTGTCCCGAGGCGACCACGTCCTCGTGACTGAAGACGTCTACGGCGGCACGTACCG
GATGATCACGGAAGTGTTGACCCGCTTTGGCATCGAGCATACGTTTGTCGATATGACCGATTTAAACGCAGTGGCCGAAA
ACATCCGACCGAACACGAAAGTCATTTATATGGAAACGCCGTCCAACCCATTGTTAAAAGTGACCGATATTCAAGGCGTC
GTCAAACTGGCGAAAGCGCACGGCTGTTTGACGTTCTTGGATAATACGTTCATGACGCCGGCGCTGCAGCGGCCGCTTGA
CCTTGGCGTCGATATTGTCCTTCACAGCGCCACGAAATTTTTAGCCGGCCATAGCGACGTCGTCGCCGGATTGGCCGTGG
TGAAAGATGAAGAGTTGGGAAAAGAGCTGTACAAACTGCAAAACGCATTTGGCGCTGTCCTTGGCGTCCAAGATGCGTGG
CTTGTGCTGCGCGGATTAAAAACGCTCCACGTCCGGCTGAAGCAGTCATCTGAATCAGCGGCCGCCATCGCCCAATATTT
GGCTTGTCACCCAAAGGTCGAAGAAGTGTATTATCCGGGGCTCGAGAACCACCCAGGCCATGACATCCAGCGCCATCAAG
CGGACGGGTTTGGCGCCGTGCTGTCGTTCCGCTTGGCCGATGAAGAAGCGGCCCGGACGTTCGTCCGCAACGTCCGCCTG
CCCGTGTTCGCCGTCAGCCTTGGGGCGGTCGAGTCAATTTTATCGCACCCAGCGAAAATGTCGCATGCGGCGATGCCAAA
AGAAGAGAGGCTCCGGCGCGGCATTACCGACGGCTTGTTGCGGCTGAGCGTCGGGCTTGAGGATGTCAACGATTTGATCG
CCGATTTTGAGCAGGCGTTGTCGTTTGTCAATGAGCATCCATCGGTCGTTCCGACGCGGTAA

Protein sequence :
MEREWSFSTKLLHNEWKVDRHTGAVSVPIQHASTFHQFDFDSFGKYDYSRSGNPTREALEETIAALEGGVRGFAFASGMA
AISTAFLLLSRGDHVLVTEDVYGGTYRMITEVLTRFGIEHTFVDMTDLNAVAENIRPNTKVIYMETPSNPLLKVTDIQGV
VKLAKAHGCLTFLDNTFMTPALQRPLDLGVDIVLHSATKFLAGHSDVVAGLAVVKDEELGKELYKLQNAFGAVLGVQDAW
LVLRGLKTLHVRLKQSSESAAAIAQYLACHPKVEEVYYPGLENHPGHDIQRHQADGFGAVLSFRLADEEAARTFVRNVRL
PVFAVSLGAVESILSHPAKMSHAAMPKEERLRRGITDGLLRLSVGLEDVNDLIADFEQALSFVNEHPSVVPTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-93 55
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-88 51
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-87 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC YP_007401101.1 cystathionine beta-lyase BAC0207 Protein 1e-66 42