Gene Information

Name : cadC1 (GHH_c06990)
Accession : YP_007400990.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Resistance
Product : cadmium efflux system accessory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 682457 - 682828 bp
Length : 372 bp
Strand : +
Note : -

DNA sequence : 
ATGCACCGTCATGATGTGTGCGACGTTTACTGTTATGACGACGAGAAGGTCGAGCGGGTTCAGCGGCGGCTTCGCGATGA
ACCAATTGCCGAGATTGTCCCTTTTTTTAAGGCGCTTGCCGATGAAAACCGGGCGAAGATCGTGTATGCGCTTTGCGGTG
AAGAGAAGCTGTGCGTCTGTGACTTAGCGAACGTGATCGGGGCGACGGTGGCGACGGCATCGCATCATTTGCGCATCTTG
TACAAACAAGGAATTGTGAAATATCGAAAAGAGGGGAAACTTGCCTTTTACTCGCTGGATGACGACCATATTCGCGAGCT
GCTGCTTGTCGCGCTCGCCCATCGGAAAGAGGGGGACGGCCGTGGGGAATGA

Protein sequence : 
MHRHDVCDVYCYDDEKVERVQRRLRDEPIAEIVPFFKALADENRAKIVYALCGEEKLCVCDLANVIGATVATASHHLRIL
YKQGIVKYRKEGKLAFYSLDDDHIRELLLVALAHRKEGDGRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 2e-25 48
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 2e-25 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadC1 YP_007400990.1 cadmium efflux system accessory protein BAC0056 Protein 1e-36 60
cadC1 YP_007400990.1 cadmium efflux system accessory protein BAC0366 Protein 8e-09 42