Gene Information

Name : acoD (GHH_c32780)
Accession : YP_007403520.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Virulence
Product : acetaldehyde dehydrogenase 2
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 3269055 - 3270575 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence :
ATGATCTACGCACAACCAGGCCAGCCAGGCGCGCTTGTCACATTTAAAAAGCGCTACGAAAACTTCATTGGCGGCAAATG
GGTGCCGCCGGTCGACGGCGAGTATTTTGAAAACATCACGCCCATCACCGGACAGCCGTATTGCGAAGTGCCGCGCTCCA
AAGCGGCGGACATCGAACTGGCGCTTGACGCCGCCCACGCGGCCAAAGACGCCTGGGGACGCACGTCTCCAGCGGAGCGC
GCCCGTTTGCTGAACAAAATCGCCGATCGGATGGAAGAACATTTGGAAATGCTGGCCGTCGCCGAAACGTGGGAAAACGG
CAAGCCGATCCGCGAGACGCTCGCGGCTGACATTCCGCTTGCCATCGACCATTTCCGCTATTTTGCCAGCTGCATCCGCG
CGCAAGAAGGCACGATTTCAGAAATCGATCACGACACAGTCGCCTATCATTTCAAAGAACCGCTCGGCGTCGTCGGGCAA
ATCATCCCGTGGAACTTCCCGATTCTCATGGCGGCATGGAAACTCGCCCCGGCATTGGCCGCAGGCAACTGCGTCGTGTT
GAAACCGGCGGAGCAAACGCCGACGTCGATCCTCGTTCTCATCGAACTCATCGAAGATTTGCTCCCACCTGGCGTCGTCA
ACATCGTCAACGGCTTTGGCTTAGAAGCCGGCAAGCCGCTCGCCTCGAACCCGCGCGTGGCGAAAGTGGCATTCACCGGC
GAAACGACGACCGGACGGCTCATCATGCAATACGCCTCGCAAAACATCGTGCCGGTTACGCTCGAGCTGGGCGGCAAGTC
CCCGAACATTTTCTTCGCTGATGTGATGGACAAAGACGATGACTTTCTTGATAAAGCGCTTGAAGGCTTTACGATGTTCG
CCTTAAACCAAGGCGAAGTGTGCACATGCCCGTCGCGCGCCCTCATCCATGAGTCGATTTACGACGCCTTTATGGAACGG
GCGCTTGAGCGCGTCAAGCAAATCAAGCAAGGCAATCCGCTCGATACGGAAACGATGATCGGCGCCCAAGCCTCCTCCGA
ACAGCTCGAGAAAATTTTGTCATACATCGACATCGGCAAACAAGAAGGCGCCGAACTTTTGATCGGCGGCGAGCGGAACA
TGCTCGAAGGAGAACTGTCCGGCGGCTATTACGTCAAGCCGACCGTTTTCAAAGGGCATAACAAAATGCGCATTTTCCAA
GAAGAAATTTTCGGCCCAGTGCTCGCGGTCACGACGTTTAAAGATCATGACGAAGCGCTTTCGATCGCCAATGAGACGCT
GTACGGCCTTGGCGCCGGCGTCTGGACGCGCGACATCAACACCGCGTACCGCTTCGGCCGCGGCATCCAGGCTGGCCGCG
TCTGGACGAACTGCTACCACGTCTATCCGGCCCATGCGGCGTTCGGCGGCTACAAAATGTCCGGCATCGGCCGCGAAACG
CACAAAATGATGCTTGACCATTACCAACAAACGAAAAACTTGCTCGTCAGCTATTCGCCGAAAAAACTGGGCTTGTTCTA
A

Protein sequence :
MIYAQPGQPGALVTFKKRYENFIGGKWVPPVDGEYFENITPITGQPYCEVPRSKAADIELALDAAHAAKDAWGRTSPAER
ARLLNKIADRMEEHLEMLAVAETWENGKPIRETLAADIPLAIDHFRYFASCIRAQEGTISEIDHDTVAYHFKEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPTSILVLIELIEDLLPPGVVNIVNGFGLEAGKPLASNPRVAKVAFTG
ETTTGRLIMQYASQNIVPVTLELGGKSPNIFFADVMDKDDDFLDKALEGFTMFALNQGEVCTCPSRALIHESIYDAFMER
ALERVKQIKQGNPLDTETMIGAQASSEQLEKILSYIDIGKQEGAELLIGGERNMLEGELSGGYYVKPTVFKGHNKMRIFQ
EEIFGPVLAVTTFKDHDEALSIANETLYGLGAGVWTRDINTAYRFGRGIQAGRVWTNCYHVYPAHAAFGGYKMSGIGRET
HKMMLDHYQQTKNLLVSYSPKKLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-131 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-139 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-139 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-139 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-139 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
acoD YP_007403520.1 acetaldehyde dehydrogenase 2 VFG0082 Protein 7e-132 66