Gene Information

Name : smpB (GHH_c31170)
Accession : YP_007403360.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3101632 - 3102099 bp
Length : 468 bp
Strand : -
Note : -

DNA sequence :
ATGCCGAAAGGCGAAGGAAAGGTCATCGCGCAAAACAAAAAAGCACATCACGATTATTTCATCGAGGAAACGTACGAAGC
CGGCCTCGTGCTGCAAGGGACGGAAATCAAATCGATCCGCAACGGCCGGGTGAATTTGAAAGATTCGTTCGCCAAAGTCG
AAAAAGGGGAAGTGTTTCTCCATAACATGCACATCAGCCCGTACGAACAAGGCAACCGCTACAACCACGATCCGCTGCGG
ACGCGAAAGCTTTTGTTGCACCGCCGTGAAATCAACAAACTGATCGGCTACACGAAAGAGCAAGGGTATACGCTCGTGCC
GCTCAAACTGTACATTAAAAACGGCTTTGCCAAAGTGGAGCTTGGTGTGGCCAAAGGGAAGAAAAAATACGACAAACGGG
AAGACATGAAGCGGAAAGAAGCGCAGCGCGAAATCGAGCGGGCGTTCCGCGAGCGGCAAAAACTGTAG

Protein sequence :
MPKGEGKVIAQNKKAHHDYFIEETYEAGLVLQGTEIKSIRNGRVNLKDSFAKVEKGEVFLHNMHISPYEQGNRYNHDPLR
TRKLLLHRREINKLIGYTKEQGYTLVPLKLYIKNGFAKVELGVAKGKKKYDKREDMKRKEAQREIERAFRERQKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-43 65
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-35 52
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-29 46