Gene Information

Name : yrkD (GHH_c21230)
Accession : YP_007402392.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Unknown
Product : DUF156 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2138179 - 2138370 bp
Length : 192 bp
Strand : -
Note : -

DNA sequence :
ATGATGGAACAAGGGAAAGACTGCAAGAGCGTCGTTTCCCAACTTTCAGCGGCGCGCAATGCCATTGACCGCGCCATTGC
CGTCATCGTCAGCACCAATTTGGAACATTGCCTGCGTGAAAGCATGGAAAAAGGAGAAAGCACAGACAGTCTTGTCAAAG
AAGCAGTGGAACTGCTTGTGAAAAGCCGTTAA

Protein sequence :
MMEQGKDCKSVVSQLSAARNAIDRAIAVIVSTNLEHCLRESMEKGESTDSLVKEAVELLVKSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB83476.1 - Not tested SCC 12263 Protein 1e-12 51
unnamed BAA94324.1 hypothetical protein Not tested Type-I SCCmec Protein 2e-12 50
SACOL0048 YP_184958.1 hypothetical protein Not tested Type-I SCCmec Protein 2e-12 50
SAPIG0063 YP_005732873.1 conserved protein YrkD Not tested Type-V SCCmec Protein 2e-12 50
unnamed BAC57484.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-12 48
SAV0048 NP_370572.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-12 48
unnamed BAA82210.2 - Not tested Type-II SCCmec Protein 2e-12 48
SA0045 NP_373285.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-12 48
SERP2514 YP_190056.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-12 48
unnamed BAB47614.1 hypothetical protein Not tested Type-III SCCmec Protein 2e-12 48
SAR0047 YP_039520.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-12 48
unnamed BAA82170.2 - Not tested Type-II SCCmec Protein 3e-12 47
unnamed BAA86632.1 hypothetical protein Not tested Type-I SCCmec Protein 1e-12 47