Gene Information

Name : gbsA2 (GHH_c20800)
Accession : YP_007402349.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.8
Position : 2097789 - 2099306 bp
Length : 1518 bp
Strand : -
Note : -

DNA sequence :
ATGGCGACTGTGAAACAAAAGAAAATGGAACCGATGCCGACCAAACGCGATTTCTATCATTTGATTGTGAACGGGGAGCG
GGTGGAAAGCGCTTCGGGAGAGACGTTTGAAGTGATCAATCCGGCCACTGGCGAACCGGTCGCCCGCGTCGCCAAAGGGA
CGCGCGAGGACGCCGAACGGGCGGTGCAGGCGGCGCGGCGGGCGTTTGATCATGGGAAATGGCGCCATTTCCCAGTGCAA
AAACGCGCCCGCATCTTGTACCAAATTGCATCCATCATGCGCGAACGTTTCAATGAATTGGTGGAATTGGAAATTTTGAA
TACCGGAAAAGCACTGTCAGCAGCTCAAGGACAAGTAATGCAAGCCATTGAAGACTTTGAGTTTTTTGCCGGAGCGATCA
TTGGCCACCGCGGGGCGGTCAACCCGATGCCAGGGGCGTTTCACAACTATACGGAAAAAGAGCCGGTTGGCGTGTGCGCC
CAAATCATTCCGTGGAACTACCCGCTCATGATGGCGGCTTGGAAAATCGCGCCTGCTCTTGCCGCAGGATGTTCGGTTGT
CGTCAAACCGGCGTCGCTGACGCCGCTCACCTGCCTGGTGCTGGCGGAAATTTGCCACGAGGCCGGGGTGCCGGAAGGGG
TCGTCAATGTGGTGACCGGCGCCGGGGCGGAAGTCGGCGACTATTTGGTGGAGCATCCGCTCGTCGACAAAGTCGCGTTT
ACCGGATCGACGCCGGTCGGGAAGGAAATTATGGAGAAAGCGTCGAAAACATTAAAACGGGTGACGCTCGAGCTGGGCGG
CAAATCGCCGAGCCTTGTATTTGCGGACGCCGATTTGGAAGCGGCTGTCGCCGGCTCATTGTTCGGCATTTTCTACAACA
GCGGACAATCGTGCGAGGCGCGCTCTCGCTTGTATGTGCATGAAAGCATTTATGACGCCTTTATGGAATCGTTCGTGGCC
AAAACGAAGCAGCTGAAACTCGGCAACCCGTTTGATGCCGGCACGCATGTCGGGGCGATCATCAGCCGCGGGCAGCTGGA
AGTGATCGATGAATACGTGCAATCGGCGGTCGCGGATGGAGCGACGATCGTTGCCGGAGGGAAAGAAGCGGTAGTCGAGG
GATTTGAAAACGGTTACTGGTATGAACCGACGATTTTGACGAACGTCAACCATCAAATGAAAGCGGTTCGCGAAGAAATT
TTCGGACCGGTTGTCGTCGTCATGAAATTCCGCGATGAAGCCGAAGCCGTTGAATTGGCGAACGATAGCGACTATGGGCT
GGCCGCCGCCGTTTGGACGAAAGATCATGGCCGCGCCGTTCGTGTAGCGAAGCAGCTGCGTTCCGGCATTGTCATGGTCA
ACAGCCCATTCTCCGCCTTCCCGGGCACGCCGTTTGGCGGCTACAAACAGTCCGGATTCGGGCGCGAGCTGTCTGTCGAG
GCGCTTGATTTGTACACAGAAACGAAAAGCGTGCTGTCGTATTACGGGCCGCGTCCGCTTAATCCGTTTGGCGTCTAA

Protein sequence :
MATVKQKKMEPMPTKRDFYHLIVNGERVESASGETFEVINPATGEPVARVAKGTREDAERAVQAARRAFDHGKWRHFPVQ
KRARILYQIASIMRERFNELVELEILNTGKALSAAQGQVMQAIEDFEFFAGAIIGHRGAVNPMPGAFHNYTEKEPVGVCA
QIIPWNYPLMMAAWKIAPALAAGCSVVVKPASLTPLTCLVLAEICHEAGVPEGVVNVVTGAGAEVGDYLVEHPLVDKVAF
TGSTPVGKEIMEKASKTLKRVTLELGGKSPSLVFADADLEAAVAGSLFGIFYNSGQSCEARSRLYVHESIYDAFMESFVA
KTKQLKLGNPFDAGTHVGAIISRGQLEVIDEYVQSAVADGATIVAGGKEAVVEGFENGYWYEPTILTNVNHQMKAVREEI
FGPVVVVMKFRDEAEAVELANDSDYGLAAAVWTKDHGRAVRVAKQLRSGIVMVNSPFSAFPGTPFGGYKQSGFGRELSVE
ALDLYTETKSVLSYYGPRPLNPFGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-76 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 8e-85 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-69 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-80 41
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 3e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gbsA2 YP_007402349.1 betaine aldehyde dehydrogenase VFG0082 Protein 2e-80 41