Gene Information

Name : gbsA1 (GHH_c19810)
Accession : YP_007402250.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.8
Position : 1990518 - 1991966 bp
Length : 1449 bp
Strand : +
Note : -

DNA sequence :
ATGATATACGTCAACGGAAAATGGAGTAAAGGAGAAGGAAAAAAAAGACCGGTCATCAATCCCGCGAATGAGGAAATCAT
TATAGAAATCAATGAAGCATCCCAACAACAAGCCGTAGAAGCGATCCAAGCAGCTCGTCATGCTTTTCAATATACCGATT
GGCCATTCAATCCAGCAAAACGGATCGCTGCGCTTCGCCAATTAGCGGACCTGTTGGAACAAAACGCAGAAACATTCGCT
TCGATCGAGACGTTGAATACAGGAAAACCGATTCGCGAGTCGCGCCTCGATGTCAGCGATTCAATCCAATGCCTTCGTTA
CTACGCCGATTTTGTTGAACAACGGGCCATCGAGGAAATAAAAAGAACCGATGGCACGACAAGCAAAATCATTGAGGAGC
CAATCGGGGTATGCGCGTTGATTGTTCCTTGGAATTTTCCTCTCTTGTTAGGAATATGGAAACTGGCTCCAGCGCTTGCG
GCGGGAAATACAGTGGTATTTAAACCATCAGAACTGACTCCGTTATCGTTCATCGAACTGACAAAGCTGATCGATTCCAT
CGGTCTCCCGCCAGGCGTGTTTAATCTTGTTCCTGGAGGCGGTTCGCCGGTTGGAGAAACATTGGTGACACACCCTGATG
TGGAAAAAATATCGTTTACCGGCGGAACGAAAACCGGACGATGGATTTACGAACAAGGCGCTCGCCGTTTGAAGCGAGTA
TCTTTGGAACTTGGCGGAAAATCCCCGCTGCTCATTTTTGACGATGCGGATCTTGCCAGCACCATCGAGTGGGCGTTGTT
TGCCTCCTTCTTCAATCAAGGAGAAGTGTGTGTGGCTGCTTCGCGAATTCTTGTTCAACGACGCGTTTATGATTCGTTTC
TTGATCAGCTGACCCAAAGACTAGCTTCCCTCCGCATTGGCGATCCTTTCGCGGAACATACGGAGATGGGGCCGTTAATC
AGCTCCTCACATTTAGAAAAAGTGGAAACGTATATCCAGATCGGCTTGCAGGAAGGAGGAGTACTGCTGCAGGGAGGAAA
ACGAATTAAAGAACTGGGGTATTATCTCACTCCTGCCGTTTTCGCCCATGTCCGTCAAGATATGCGCATCGTCCAAGAAG
AAATCTTTGGACCGGTCATAACCGTACAACCGTTTGAACATGATGAAGAGGCGATCAAGTTGGCGAATGACACCATATAC
GGTCTGGCAGCCGGCCTATTCAGCCGCGATCTCGAACGGGCGGAACAAATCGCCGGGAAATTGAGAGCAGGAACGATTTG
GATTAACAGCTATCACACTCCCTATGTCGATGCCCCTTGGGGAGGATTGAAACAAAGCGGAATCGGCCGAGAGCTTGGAC
CGCAAGGATTCGCTGCTTTTACGGAAACAAAGCATGTGAACATCAGCCAACATGGCAAACCACTCGGATGGTATTCATCG
CACTCCTGA

Protein sequence :
MIYVNGKWSKGEGKKRPVINPANEEIIIEINEASQQQAVEAIQAARHAFQYTDWPFNPAKRIAALRQLADLLEQNAETFA
SIETLNTGKPIRESRLDVSDSIQCLRYYADFVEQRAIEEIKRTDGTTSKIIEEPIGVCALIVPWNFPLLLGIWKLAPALA
AGNTVVFKPSELTPLSFIELTKLIDSIGLPPGVFNLVPGGGSPVGETLVTHPDVEKISFTGGTKTGRWIYEQGARRLKRV
SLELGGKSPLLIFDDADLASTIEWALFASFFNQGEVCVAASRILVQRRVYDSFLDQLTQRLASLRIGDPFAEHTEMGPLI
SSSHLEKVETYIQIGLQEGGVLLQGGKRIKELGYYLTPAVFAHVRQDMRIVQEEIFGPVITVQPFEHDEEAIKLANDTIY
GLAAGLFSRDLERAEQIAGKLRAGTIWINSYHTPYVDAPWGGLKQSGIGRELGPQGFAAFTETKHVNISQHGKPLGWYSS
HS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 3e-73 41
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-67 41
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gbsA1 YP_007402250.1 betaine aldehyde dehydrogenase VFG0082 Protein 3e-67 41