Gene Information

Name : GHH_c17200 (GHH_c17200)
Accession : YP_007401998.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1716050 - 1716802 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence :
ATGAGAGCAGAGGTGAAAGAGATTTGTAAAGCGCTGCATTTGGCCTATATCGCAGATCGATTCGAGGAGGTGAGATTCGA
AACGAAAGAACAGTTTTTGCGGGATGTATTGGCGCTGGAACTGTCGTGCCGCCAAGAAGCGAAACAGGCTCGGCTGATCA
AGAAAGCCAAGTTTCGGGAGTTGAAATGGCTGAAGGATTACGAATGGTCGGGTCATATCCATTGGCCAGCCACGACATCG
AGGGAGGAACTGTGTGACCTTCGCTTTTTGGAGCGAAAGCAAAACGTTCTGCTTTTAGGTTCACCTGGAACGGGGAAAAC
CCATATCGCCACAGCACTTGGCATTCAGGCGTGCCAACAAGGCCATGAGGTTCGGTTTTTCCGCGTCGCGGATCTTGTCG
CCCAGCTGGAAGAGGCGTTGAAAAACGGCACGCTCGGACGGCTGAAACGAAGCCTCGACCCATGCGAACTGTTGATTTTG
GATGAACTCGGCTATGTGCCGTTTCAAAAGCAAGGATCGGAACTGTTGTTTCATATTATCGCCGACTGTTACGAGCGAAA
AAGCGTCATGGTGACATCGAATCTAGAATTTGGACAGTGGAATCGGGTGTTTGGGGACAACCGTTTGACGGCAGCGTTAG
TGGATCGCTTGGTTCACCATGCCCACATCTTGGCCTTCACGGGAGAGAGCTATCGACTGCGGAACGCTCTCTCCGCGATC
CAGCCGTCCTCTGCCCCCGGTCTGGAACCTTAA

Protein sequence :
MRAEVKEICKALHLAYIADRFEEVRFETKEQFLRDVLALELSCRQEAKQARLIKKAKFRELKWLKDYEWSGHIHWPATTS
REELCDLRFLERKQNVLLLGSPGTGKTHIATALGIQACQQGHEVRFFRVADLVAQLEEALKNGTLGRLKRSLDPCELLIL
DELGYVPFQKQGSELLFHIIADCYERKSVMVTSNLEFGQWNRVFGDNRLTAALVDRLVHHAHILAFTGESYRLRNALSAI
QPSSAPGLEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 4e-37 46
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 2e-37 42
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 9e-34 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-37 41
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 7e-38 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-37 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-37 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-37 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-37 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-37 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-37 41
unnamed CAA21402.1 - Not tested HPI Protein 2e-37 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-37 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-37 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GHH_c17200 YP_007401998.1 transposase VFG1460 Protein 5e-34 41
GHH_c17200 YP_007401998.1 transposase VFG1663 Protein 4e-38 41
GHH_c17200 YP_007401998.1 transposase VFG1627 Protein 9e-38 41
GHH_c17200 YP_007401998.1 transposase VFG1606 Protein 9e-38 41
GHH_c17200 YP_007401998.1 transposase VFG1515 Protein 9e-38 41