Gene Information

Name : topB (GHH_c16950)
Accession : YP_007401974.1
Strain : Geobacillus sp. GHH01
Genome accession: NC_020210
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : -
COG ID : -
EC number : 5.99.1.2
Position : 1692944 - 1695037 bp
Length : 2094 bp
Strand : -
Note : -

DNA sequence :
ATGAAATCGCTCGTGTTAGCGGAAAAGCCGAGCGTCGCCCGCGACATTGCCCGCGTGCTCGGCTGCAAAGAAACGCATCA
ATCGTATATGGAAGGACCGCGCTACATCGTCACCTGGGCGCTCGGCCATTTAGTTGAGCTGAAGATGCCGGAAGACTACG
ACCGGAAATACGAAACATGGCGGCTGGAGGACTTGCCGATCATCCCAAAGAAAATGGGCTTGAAAGTCATCCGGCAAACG
AGCCACCAGTTTCGCGCCATTGAACGGTTGGCGAAACGACCGGATGTGAAAGATGTCATCATCGCGACCGACGCGGGCCG
CGAGGGGGAACTGGTGGCGCGCTGGATTTTAGAGATGATCGGTTGGACGAAGCCGATTTGGCGGCTATGGATCTCCTCGC
AAACCGACCGCGCCATCCGCGACGGCTTCCGCCAACTCAAGCCCGGGGCGCAGTTTGACCGGCTGTATCAATCGGCCGTC
TGCCGCGCCGAAGCCGACTGGCTGATCGGGTTAAACGTCTCGCGCGCCTTGACGACCAAATACAACGATCCGCTTTCCGC
CGGGCGCGTGCAGACGCCAACGCTCGCGATGATCATCGAGCGCGAACGCGAGATCCAATCGTTCGTTCCCGTGCCATATT
GGACGATTCGGGCCAAGATCGGTTCCATCACGGCCGTATGGGAGCGGCATGGAGGACATCGTCTGTTTGACCAAGACGAA
GCGAAGCAGCTGCTCGCCCGCCTTGACGGTCAGCCGGCGCGCGTCGTGTCCGTCAAGCGGAAACGAAAAAGCGAGCCCGC
CCCGCTGCCGTATGATTTAACCGAGCTGCAGCGGGACGCGAACAAGCGGTTTGGCTTTTCGGCGAAAAAGACGCTCTCGG
TGTTGCAGCGGCTGTATGAACAACACAAACTCGTCACGTACCCGCGCACCGATTCGCGTTATTTGCCAAGCGATATGGAA
GCGACGATGACCGAGCGGTTGTTGGCGATGAAATCCGGTTATGAGGACGTCATCGCTCCGCTCCTTGCCAAAGGCAAAGC
CAAAGCAGCCAAGCGGGTATTTAACGATGACAAAGTGACCGATCATCACGCCATCGTTCCAACGGATGAGCGGCTCAACC
TTAGCAGGCTGTCGACTGATGAGCGCAAGCTGTATGATCTCATCGCCCGTCGCTTTTTGGCGCTGTTTTTCCCGCCGTAT
GAATCCGAAACAACGACAGCTGTCTTTGACATCGGCGGCGAAATGTTTGTCGCCAAGGAGACGGCGGTTGTCAACGCCGG
ATTTCAAGCCGTTCTCAGCAAAGAAGACAACAAGGCCCAACCAACGTTGTTGCATCTCGCGGAAGGCCAGACGCTCCCAT
CAGTGCAACTTGAGCTGGAACAATCGTTCACGGAACCGCCTGCCCGTTATTCGGAAGCTGACTTGCTCGCGCAAATGGAG
AAATACGGGCTCGGCACGCCGGCGACAAGAGCGGACATCATCGAACGGCTGGTTGAAACCGAAGTGGTCGAGCGAAAAGA
CGGACGGTTTTATCCGACAAAAAAAGGGAAACAGCTGATTGAGCTCGTCAATGAAGAGCTGAAATCGCCGGAATTGACCG
CCCGCTGGGAGCGGGAGCTGGAGGCGATCGCCCGCGGGAAAGGAAATCCACAACAATTTTTGGCCAACATCCGCCGGCAA
ACGCAGCAGCTCGTTGCCGAAATTAAGCAAAGCGAGCAGGTATACAAAGCGCCAAACCTCACGAATCTGACGTGTCCAGA
ATGCGGCGCGCTTTTAAAAGAGCGGAAAACGAAAGACGGACGGATGCTTGTCTGCTCGAACTTACAATGCCGCTACCGCC
GCCGGCGCGACCCGAAACTGTCGAACCGCCGCTGTCCGCAATGCCACCGGCGCATGGAAATGCATGAAGGAAAGGCAGGA
CTTTATTTCCAATGCCGCCCGTGCAATATTGTCGAAAAAGCGGACGAGACCAAACGCATCGCCGCCAAAGGCAGCGAACG
GGCGCTTCTCAAAAAATACAGCGCGTCGAACGAATCGTTTGGAGTCAGTTTAGGAGAGCTGCTCAAGCAGGCATTGAGCC
AAAAAGAGGAATGA

Protein sequence :
MKSLVLAEKPSVARDIARVLGCKETHQSYMEGPRYIVTWALGHLVELKMPEDYDRKYETWRLEDLPIIPKKMGLKVIRQT
SHQFRAIERLAKRPDVKDVIIATDAGREGELVARWILEMIGWTKPIWRLWISSQTDRAIRDGFRQLKPGAQFDRLYQSAV
CRAEADWLIGLNVSRALTTKYNDPLSAGRVQTPTLAMIIEREREIQSFVPVPYWTIRAKIGSITAVWERHGGHRLFDQDE
AKQLLARLDGQPARVVSVKRKRKSEPAPLPYDLTELQRDANKRFGFSAKKTLSVLQRLYEQHKLVTYPRTDSRYLPSDME
ATMTERLLAMKSGYEDVIAPLLAKGKAKAAKRVFNDDKVTDHHAIVPTDERLNLSRLSTDERKLYDLIARRFLALFFPPY
ESETTTAVFDIGGEMFVAKETAVVNAGFQAVLSKEDNKAQPTLLHLAEGQTLPSVQLELEQSFTEPPARYSEADLLAQME
KYGLGTPATRADIIERLVETEVVERKDGRFYPTKKGKQLIELVNEELKSPELTARWERELEAIARGKGNPQQFLANIRRQ
TQQLVAEIKQSEQVYKAPNLTNLTCPECGALLKERKTKDGRMLVCSNLQCRYRRRRDPKLSNRRCPQCHRRMEMHEGKAG
LYFQCRPCNIVEKADETKRIAAKGSERALLKKYSASNESFGVSLGELLKQALSQKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00720 YP_008394244.1 DNA topoisomerase III Not tested Not named Protein 6e-105 41