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Name : clpC (GHH_c01020) Accession : YP_007400446.1 Strain : Geobacillus sp. GHH01 Genome accession: NC_020210 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : - COG ID : - EC number : - Position : 98986 - 101418 bp Length : 2433 bp Strand : + Note : ATPase subunit of the ClpC-ClpP protease DNA sequence : ATGATGTTTGGCAGATTTACGGAACGGGCGCAAAAAGTGCTGGCGCTGGCGCAGGAAGAAGCCATTCGCCTCGGCCATAA CAATATCGGCACAGAACATATTTTGCTCGGCCTCATCCGCGAGGGCGAGGGGATCGCGGCTAAGGCGCTCATGGCGCTTG GGCTCGGCCCAGATAAAATTCAAAAAGAAGTCGAATCGCTCATCGGCCGTGGCAGTGAAGTGTCGCATACGATCCACTAT ACACCGCGGGCGAAAAAAGTCATTGAGCTGTCGATGGATGAAGCGCGGAAGCTCGGCCATTCATACGTCGGCACAGAACA TATTTTGCTTGGGTTGATCCGCGAAGGCGAAGGGGTGGCCGCCCGCGTGCTGAACAACTTGGGAGTAAGCTTGAACAAAG CGCGCCAGCAAGTGTTGCAGCTGCTCGGCAGCAATGAGTCGATGTCAGGCCATGGCGGCGGCGCGTCGCATGTGAGCACT CCGACGCTTGACAGCCTCGCCCGTGATTTGACAGCGATTGCCCGCGAAGGACGGCTGGACCCGGTCATCGGCCGCAGTAA AGAAATTCAGCGCGTCATTGAAGTATTAAGCCGGCGGACGAAAAATAATCCGGTGTTGATCGGCGAGCCGGGCGTTGGGA AAACGGCCATTGCTGAAGGGTTAGCCCAACAAATCGTCAATAACGAAGTGCCGGAAACGCTGCGCGACAAGCGGGTCATG ACGCTCGATATGGGGACGGTCGTCGCCGGAACGAAATACCGGGGGGAATTTGAAGACCGGCTGAAAAAAGTGATGGATGA AATTCGTCAAGCGGGCAACATCATCTTGTTCATCGATGAGTTGCATACATTAATTGGCGCCGGTGGGGCAGAAGGAGCGA TCGACGCGTCGAACATCTTGAAACCGGCGTTGGCGCGCGGGGAGCTTCAATGCATCGGCGCGACAACGCTCGATGAATAC CGGAAATATATTGAAAAAGACGCCGCGCTTGAACGCCGCTTTCAGCCGATTTACGTTGATGAACCGACAGTGGAAGAATC GATCCAAATTTTAAAAGGGTTGCGCGATCGGTATGAAGCGCACCACCGCGTTTCGATTTCCGACGAGGCGATCGTGCAAG CCGTCAAATTGTCCGACCGCTACATTACCGACCGTTTCTTGCCGGATAAGGCGATCGATTTGATCGACGAGGCTTGCTCG AAAGTGCGCCTTCGTTCGTTCACCGCACCGCCGAAATTGAAAGAACTTGAACAAAAGCTCGAGGAAGTGCGGAAAGAAAA AGACGCGGCCGTGCAAAGCCAAGAATTTGAAAAAGCAGCATCGCTGCGCGATATGGAACAGCGGCTGCGCGAAGAACTGG AGGAAACGAAACGTGCGTGGAAAGAAAAACAAGGCCAAGAAAATTTGGAAGTGACGGTCGAAGACATCGCCGCGGTCGTC TCGAGTTGGACCGGCATTCCAGTATCGAAGCTCGCTGAGACGGAAACGGAGCGGCTGCTCAAGCTGGAAGAAATTTTGCA TTCGCGTGTCGTCGGCCAAGACGAGGCGGTCAAAGCGGTCGCCAAAGCGGTGCGCCGCGCCCGTGCTGGCCTGAAAGACC CGAAACGCCCGATCGGTTCGTTCATTTTCCTTGGTCCGACCGGCGTTGGGAAAACGGAGTTGGCCCGAGCCTTGGCAGAA GCGATGTTTGGCGATGAAGACGCCCTCATTCGCATCGATATGTCCGAGTATATGGAAAAACACTCGACATCGCGGCTCAT CGGGTCGCCGCCGGGGTATGTCGGTTATGAAGAAGGCGGCCAGCTGACGGAAAAAGTGCGCCGCAAGCCGTATTCGGTTG TCCTGTTAGATGAGATGGAAAAAGCGCATCCGGACGTGTTCAATATTTTGCTGCAAGTGTTGGAAGATGGGCGGCTGACT GACTCGAAAGGGCGGACGGTCGACTTCCGCAACACGATCATCATCATGACATCCAACGTCGGCGCCGATGCGCTGAAACG GAATAAGTACGTTGGCTTCAACATTCAAGACGGGAACCAGCAATACAAAGATATGAAAAGCAAAGTGATGGATGAGCTGA AAAAAGCATTCCGTCCAGAGTTTTTAAACCGGATCGACGAAATCATCGTCTTCCATTCGCTCGAAAAAGACCATCTGAAA CAAATCGTCCGATTGATGGCCGATACGCTCGTGAAGCGGCTGAAAGAGCAAGACATTGATCTTGAGCTGACGGAGGCCGC CATTGAGAAAATCGCCGCCGAAGGGTTCGATCCAGAATACGGTGCCCGTCCGCTGCGCCGCGCCTTGCAAAAGCATGTTG AAGACCGTTTGTCCGAAGAATTGTTAAAAGGCACGATCGCCAAAGGGCAAAAAGTCGTCGTGGATGTCAAAGACGGGGAG TTTGTCGTATTGTCGAAACAGGCGGTCGTGTGA Protein sequence : MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQKEVESLIGRGSEVSHTIHY TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESMSGHGGGASHVST PTLDSLARDLTAIAREGRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVM TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEY RKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDEAIVQAVKLSDRYITDRFLPDKAIDLIDEACS KVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREELEETKRAWKEKQGQENLEVTVEDIAAVV SSWTGIPVSKLAETETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE AMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGRLT DSKGRTVDFRNTIIIMTSNVGADALKRNKYVGFNIQDGNQQYKDMKSKVMDELKKAFRPEFLNRIDEIIVFHSLEKDHLK QIVRLMADTLVKRLKEQDIDLELTEAAIEKIAAEGFDPEYGARPLRRALQKHVEDRLSEELLKGTIAKGQKVVVDVKDGE FVVLSKQAVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-88 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_007400446.1 | ATP-dependent Clp protease | VFG0079 | Protein | 0.0 | 79 |
| clpC | YP_007400446.1 | ATP-dependent Clp protease | VFG0080 | Protein | 3e-141 | 53 |
