Gene Information

Name : H045_00470 (H045_00470)
Accession : YP_007395666.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : type III secretion system transcriptional regulator RspS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 105725 - 106447 bp
Length : 723 bp
Strand : -
Note : COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

DNA sequence : 
GTGAACTGTGCGGCCATTCCCGAAAGTCTCGCAGAAAGCCAACTGTTCGGAGTCAACAGCGGCGCGTTCACCGGGGCGAT
GCAGTCGCGAGCCGGCTTTGTTGAGGCGGCCCATCTGGGCACTCTTTACCTCGATGAGATCGACAGTATGCCTTTGAGCC
TGCAGGCCAAACTGCTGCGTGTGCTGGAGTCGCGCGGCGTGGAACGCCTGGGCTCGACGCGCTTCATTCCTGTGGACATG
CGGGTCATCGCTTCCGCCCAGCATTCGCTGCATGCGATGGTCGAACAGGGCACTTTCAGGCGCGATCTGTTCTTTCGCTT
GAATGTCGTGACTATCCAGCTTCCGGCCCTGCGGGACCAGCGAGAAAGGATCGTTCCACTGTTCTTGCAGATGGTCCGGC
AAGAAGCCGAGCTTTTCGAATGCCCTGCGCCGACGCCCACCGCCGAGCTGTTGCAACAACTGTTGTGCCAATCCTGGTTG
GGCAATATCCGGGAACTACGCTCGACGGCCAAGCGATTCGTACTGGGCCTGCCACCGCTTTCCCCGCCACTGAGCAAGCC
GCAAGGCAATGAAATGAGCCTGAAAGCGCGTCTGCAGGAAATCGAAAAAGCACTGATCGAAGAATCAATGCAGCGCAACG
ACCGCTGCGTGGATCGCGTGGCTATTGAGATGGGCATTGCCAAGCGCACGCTCTACCACCGAATGAAGCAGCTTGCCATC
TAG

Protein sequence : 
MNCAAIPESLAESQLFGVNSGAFTGAMQSRAGFVEAAHLGTLYLDEIDSMPLSLQAKLLRVLESRGVERLGSTRFIPVDM
RVIASAQHSLHAMVEQGTFRRDLFFRLNVVTIQLPALRDQRERIVPLFLQMVRQEAELFECPAPTPTAELLQQLLCQSWL
GNIRELRSTAKRFVLGLPPLSPPLSKPQGNEMSLKARLQEIEKALIEESMQRNDRCVDRVAIEMGIAKRTLYHRMKQLAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpR AAT96162.1 HrpR Virulence T-PAI Protein 2e-64 62
hrpR AAT96216.1 HrpR Virulence T-PAI Protein 2e-64 62
hrpS AAT96161.1 HrpS Virulence T-PAI Protein 4e-61 61
hrpS AAT96215.1 HrpS Virulence T-PAI Protein 4e-61 61
hrpR NP_791206.1 type III transcriptional regulator HrpR Virulence Hrp PAI Protein 2e-63 60
hrpR AAC34752.1 HrpR Virulence Hrp PAI Protein 3e-63 60
hrpS NP_791207.1 type III transcriptional regulator HrpS Virulence Hrp PAI Protein 1e-59 59
hrpS AAC34753.1 HrpS Virulence Hrp PAI Protein 2e-57 58
hrpS ABQ88367.1 HrpS Virulence Hrp PAI Protein 4e-58 58
hrpS AAA17650.1 positive regulatory factor Not tested Hrp PAI Protein 4e-58 58
hrpS AAC35800.1 transcriptional regulator Virulence Hrp PAI Protein 1e-58 58
hrpR AAC35799.1 transcriptional regulator Virulence Hrp PAI Protein 2e-61 58
unnamed AAT96283.1 HrpS/HrpR-like protein Not tested S-PAI Protein 5e-64 58
unnamed AAT96324.1 HrpS/HrpR-like protein Virulence S-PAI Protein 5e-64 58
unnamed AAT96363.1 HrpS/HrpR-like protein Virulence S-PAI Protein 2e-63 57
hrpS AAD24684.1 sigma-54-dependent enhancer-binding protein HrpS Virulence Hrp PAI Protein 5e-57 57
hrpRS ABA47311.1 HrpRS Virulence S-PAI Protein 3e-64 56
hrpR ABQ88368.1 HrpR Virulence Hrp PAI Protein 1e-58 55
hrpR AAA17651.1 positive regulatory factor Not tested Hrp PAI Protein 1e-58 55