Gene Information

Name : H045_04680 (H045_04680)
Accession : YP_007396508.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : WbpP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1009025 - 1010050 bp
Length : 1026 bp
Strand : +
Note : COG0451 Nucleoside-diphosphate-sugar epimerases

DNA sequence : 
ATGTCCCGCTATGAAACGCTCCTGGAAACACTCAAGACCTCACCTAAAACGTGGTTGATCACTGGGGTGGCTGGATTTAT
TGGCTCCAATTTATTGGAGACCTTGCTTGGTCTGAATCAAGTTGTTGTCGGCCTTGACAACTTTGCGACGGGCCATCAGC
GCAATCTCGATGAGGTTAAAGGTACGGTCGCTGCGCAGCAGTGGGCTCGTTTTAGCTTCATCGAAGGTGATATCAAGGTA
TTGGATGACTGTCAGCGCGCATGTGGAGGGGTGGATTACGTATTGCACCAGGCGGCGCTTGGGTCGGTACCACGTTCCCT
CAATGACCCAATCGCTACAAATGCTACCAATATTGATGGCTTCCTTAACATGTTGGTGGCGGCCAGGGATGCGCAAGTAA
AAAGTTTCACTTACGCTGCCAGTAGTTCTACTTACGGAGATCACCCGGGTTTGCCGAAAGTGGAAGACGTTATTGGCAAA
CCACTCTCCCCATACGCAGTTACCAAATATGTCAACGAGCTCTACGCTGATGTTTTCGCAAAGTGTTATGGCTTTGATAC
TATTGGTCTTCGGTATTTTAATGTTTTCGGTAAGCGTCAAGACCCTGAGGGAGCATATGCAGCAGTGATACCCAAATGGG
CTGCCTCCATGATCAATGACGAAGACGTTTTTATCAATGGCGATGGCCAAACGAGTCGGGATTTTTGTTTTATCGAAAAT
ACCGTCCAAGCTAACTTGTTAGCTGCCACCACTACAGATTCGACCTCACGTAATCAGGTTTACAACGTTGCAGTCAGCGG
TCGAACAGATCTAAATATGCTGTTTACTTCTCTACGTGACGCATTGGCGAAAAATGGGATTAAATATGATAAGCCACCAG
TGTATCGGGATTTTCGAGCGGGGGACGTTCGCCATTCGCAAGCAGATATCAGCAAAATAAAAAATAAACTTCAGTATGAG
CCGCATTTTAACATCGTTGAGGGTGTTGAAAAAGCTATGCCATGGTACGTACAGTTTTTGAGTTAA

Protein sequence : 
MSRYETLLETLKTSPKTWLITGVAGFIGSNLLETLLGLNQVVVGLDNFATGHQRNLDEVKGTVAAQQWARFSFIEGDIKV
LDDCQRACGGVDYVLHQAALGSVPRSLNDPIATNATNIDGFLNMLVAARDAQVKSFTYAASSSTYGDHPGLPKVEDVIGK
PLSPYAVTKYVNELYADVFAKCYGFDTIGLRYFNVFGKRQDPEGAYAAVIPKWAASMINDEDVFINGDGQTSRDFCFIEN
TVQANLLAATTTDSTSRNQVYNVAVSGRTDLNMLFTSLRDALAKNGIKYDKPPVYRDFRAGDVRHSQADISKIKNKLQYE
PHFNIVEGVEKAMPWYVQFLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-113 67
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-113 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_04680 YP_007396508.1 WbpP VFG0430 Protein 1e-113 67