Gene Information

Name : H045_04675 (H045_04675)
Accession : YP_007396507.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1007703 - 1008980 bp
Length : 1278 bp
Strand : +
Note : COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase

DNA sequence : 
ATGCAAAAACTGGAAGATATTAAGCTCGCCATTATAGGTCTTGGATATGTTGGCTTGCCCCTTGCGGTGGAGTTTGGCAA
GCATCGGACGGTGGTTGGGTTTGACATCAACCAGCCGCGTATCGAGGCCCTGAGAGCAGGGCACGACGCCACGTTGGAAG
TGAGCGATGAGGAGTTGAAGCAGGCCGGTAAGCTCAGCTTCAGTTTTAATCTGGACGAATTGTCCAGCTGCAATACGTTC
GTCGTGACAGTGCCTACGCCGATTGATGAGTACAACCAGCCAGACCTTACTCCACTGATCAAAGCGTCAGAAAGTATCGG
TAAGGTACTGAAGAAAGGCGACTTGGTTATTTATGAGTCGACCGTCTATCCCGGCGCAACCGAAGAAGACTGTGTGCCCA
TACTTGAGAAGTTTTCAGGATTAAAATTCAACGTCGATTTTTTTGCCGGATACAGCCCTGAGCGTATTAATCCGGGAGAC
AAGGAGCATCGTGTCACTACGATCAAGAAGGTGACTTCCGGATCTACACCTGAGATCGCTGACCTAGTGGATGCTCTTTA
CAACCAGATCATTATTGCGGGCACGCACAAGGCAAGCAGCATTAAAGTTGCCGAAGCTGCAAAGGTTATTGAAAACACAC
AGCGCGACTTAAACATCGCTCTAATCAATGAATTGGCCATTATTTTCAATAAAATGGGTATTGATACGGAGTCAGTGCTC
CAGGCTGCGGGTACGAAATGGAATTTCCTGCCATTTCGGCCTGGCTTGGTGGGCGGTCACTGCATCGGCGTCGACCCCTA
CTACTTGACTCACAAGGCTCAGTCCATCGGCTATCACCCCGAAATCATTCTCGCGGGTCGTCGTCTCAATGACGGAATGG
GCGCGTATGTGGTCTCCCAGTTGGTAAAAACGATGGTTAAGCGCCGTATTCATGTCGATGGCGCTCGTGTACTGATTATG
GGCCTGGCGTTCAAGGAGAACTGCCCGGACCTGCGTAACACGCGAATCGTGGATATTGTCAATGAGTTGAAAGAGTACAA
TATTGCAGTGGATATTTATGATCCATGGGTCAGCCCTGAAGAGGCCAACCGTGAATATGGCATAACGCCTATTGCCGAAC
CGGGCACTGATGTCTATGACGGTATTGTGCTGGCCGTTGCACATAATGAATTCAAGGCACTGGGCGCTGAAAAAATTCGC
AAGTTTGGTAAGTCTGAGCATGTTCTTTACGATCTAAAATATCTGCTGAGTCGTGAAGAGTCTGATATTCGTTTGTAA

Protein sequence : 
MQKLEDIKLAIIGLGYVGLPLAVEFGKHRTVVGFDINQPRIEALRAGHDATLEVSDEELKQAGKLSFSFNLDELSSCNTF
VVTVPTPIDEYNQPDLTPLIKASESIGKVLKKGDLVIYESTVYPGATEEDCVPILEKFSGLKFNVDFFAGYSPERINPGD
KEHRVTTIKKVTSGSTPEIADLVDALYNQIIIAGTHKASSIKVAEAAKVIENTQRDLNIALINELAIIFNKMGIDTESVL
QAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDGMGAYVVSQLVKTMVKRRIHVDGARVLIM
GLAFKENCPDLRNTRIVDIVNELKEYNIAVDIYDPWVSPEEANREYGITPIAEPGTDVYDGIVLAVAHNEFKALGAEKIR
KFGKSEHVLYDLKYLLSREESDIRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 9e-142 68
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 9e-142 68
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-106 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_04675 YP_007396507.1 UDP-glucose/GDP-mannose dehydrogenase-like protein VFG0431 Protein 4e-142 68