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Name : lysS (H045_02970) Accession : YP_007396166.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 644681 - 646183 bp Length : 1503 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGCGACCAAGAACTCGACCCGCAAGCCCTGCAACAGGAAGAAAACTCCCTGATCGCCCTGCGCAAGGAAAAGCTTGC TGCCGAGCGCGCCAAGGGCAATGCCTTCCCCAACGACTTCCGCCGCGACGACTACTGCGATGCCCTGCAGAAGCAGTACG TGGACAAGACCAAGGAAGAGCTGGCAGAGGCTGCGATCCCGGTCAAGGTGGCAGGTCGCATCATGCTCAACCGTGGCTCG TTCATGGTGATCCAGGACATGACCGGGCGTATCCAGGTCTACGTCAACCGCAAGACCCTGCCTGAAGAAACCCTGGCTTC GGTAAAAACCTGGGACATGGGCGACATCATTGCCGCCGAAGGCACCCTGGCCCGTTCCGGCAAGGGCGACCTGTACGTCG AAATGACCAGCGTGCGTCTGCTGACCAAATCCCTGCGCCCGCTGCCGGACAAGCACCACGGCCTCACCGACACCGAGCAG CGTTATCGCCAGCGCTACGTTGACCTGATCGTCAACGAAGATGTGCGCCAGACCTTCCGCGTGCGCTCGCAGGTGATCGC CCACATCCGCAGTTTCCTTGCCAAGCGTGACTTCCTCGAAGTCGAAACCCCGATGCTGCAGACCATTCCCGGGGGCGCCG CAGCCAAGCCGTTCGAGACGCACCACAACGCGCTGGACCTGCCGATGTTCCTGCGCATCGCGCCTGAGCTGTACCTCAAG CGTCTGGTGGTCGGTGGCTTTGAGAAAGTGTTCGAGATCAACCGCAACTTCCGTAACGAAGGCGTCTCGACCCGTCACAA CCCTGAATTCACCATGTTGGAGTTCTACCAGGCCTACGCCGACTACGAAGACAACATGGACCTCACCGAAGAACTGTTCC GCGAGCTGGCGCAGCTGGTACTGGGCAGCACCGACGTGCCGTACGGCGACAAGCTGTTCCACTTCGGCGAGCCGTTCGTG CGCCTGTCGGTGTTCGACTCGATCCTCAAGTACAACCCCGAGCTGACCGCCGCCGACCTCAACGACATCGACAAGGCTCG CGCCATCGCCAAAAAAGCCGGCGCCAAGGTGCTGGGGTTCGAAGGCCTGGGCAAGCTGCAGGTGATGATTTTCGAAGAGC TGGTGGAGCACAAGCTGGAGCAGCCGCACTTCATTACGCAGTACCCGTTCGAAGTGTCGCCGCTGGCCCGTCGCAATGAT GACAACCCGAACGTGACCGACCGTTTCGAGCTGTTCATCGGCGGCCGCGAAATCGCCAACGCCTACTCCGAGCTTAACGA CGCGGAAGACCAGGCCGAGCGCTTCATGGCCCAGGTGGCCGACAAGGACGCTGGTGACGACGAGGCCATGCACTACGACG CCGACTTCGTGCGTGCCCTGGAATACGGTATGCCGCCCACCGCCGGTGAAGGTATCGGCATCGACCGTCTGGTGATGCTG TTGACCAACTCGCCGTCGATCCGCGATGTGATCCTGTTCCCTCACATGCGGCCGCAAGCCTGA Protein sequence : MSDQELDPQALQQEENSLIALRKEKLAAERAKGNAFPNDFRRDDYCDALQKQYVDKTKEELAEAAIPVKVAGRIMLNRGS FMVIQDMTGRIQVYVNRKTLPEETLASVKTWDMGDIIAAEGTLARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLAKRDFLEVETPMLQTIPGGAAAKPFETHHNALDLPMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKLFHFGEPFV RLSVFDSILKYNPELTAADLNDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRND DNPNVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-134 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-76 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007396166.1 | lysyl-tRNA ligase | VFG1668 | Protein | 3e-134 | 60 |
