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Name : H045_02405 (H045_02405) Accession : YP_007396053.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Virulence Product : putative fimbrial outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 520642 - 523200 bp Length : 2559 bp Strand : + Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGACACTGGCAGGAACAGCGCTTGGGGCAGGAGACATCGAGTTCAATACCGATGTTCTTGATCTGAGTGATCGCACCAA TATCGATTTGTCTCGGTTCGCGCGCAGCGGGTTTATCCTGCCGGGCACCTACTCGATGGTCGTGCAGTTGAATGGCCAGG CTATTCCTGAGCAATCGGTGGCGTTTTACGCCCCTGACGATGATCCGAAGGGGAGCCAGGCCTGTTTATCCGCAAGCCTT GTCGAGCAGTTGGGTATCAAAGCGGCCGCAGCGGCCAAGTTCACCTGGTGGAGAGACGGCGAGTGCCTGGACACGCAAAG CCTGCCCGGCATGGAAGTCACTGGCGACCTGGCCACCTCCACGCTGACGATCAGTTTGCCCCACGCCTACCTTGAGTACA GCGCCATCAACTGGGACCCGCCCGCGCGTTGGGACGAAGGCGTGCCAGGGCTGCTGGTCGACTACAACCTGACGGCGCAG TCCAACTACCGAAGAAACGACGGCACCCGCAACAACCTCAGTGGCAACGGCACGGTGGGCGCCAATGCCGGCGCCTGGCG CGTGCGCGCCGATTGGCAGGGGCGGGTCGAGCGCGCCAGCGAAGGCGCCTACGGCAATCAGAAGCTCGAATGGAGCCGCT ACTACGCGTACCGCGCCATTCCTGCACTAAAGGCGCGCCTGGTAGTGGGCGAGGACTACCTGTATTCGGACCTGTTCGAC AGCTTCCGCTTTACCGGTGCCTCGCTCAATTCCGATCAGAGTCAGTTGCCGCCCAACCTGCGCGGTTACGCCCCCGAAGT GGTGGGCGTGGCCAAGACCAATGCCAAGGTCATCATCAGCCAGAAGGGCCGCGTGCTCTATGAAACCCTGGTGGCCGCCG GCCCGTTTCGTATCCAGGATCTGCACGACGCGGTGACGGGCTCGCTGGATGTGCGGGTCGAAGAACAGGACGGTTCGGTG CACAGCTTCAAGGTGGATACCGCCGGCGTGCCTTACCTGACGCGACCTGGGCAGGTGCGTTACAAGCTGGCGGCCGGGCG ACCGTCCAACCTGCAGTACGGCGGCGACGGCAACATGTTCGGCACCGGGGAATTCTCCTGGGGTGTCAGCAACGGTTGGT CGTTGTTTGGCGGCGGCATGACGGACAACAACTATCGCGCCCTGTCCGTCGGGGCCGGTCGCGATCTGCTGGCCTTCGGC GCCGTGTCGGTCGACGTCACCCAGTCCCACGCCCAACTCTGGGGCGATACCCTCACGGGCAAATCCTACCGCCTGCAATA CTCCAAGAACTTTGAGGAGTACGACAGCCAGGTGACGTTCGCCGGTTACCGCTTCTCCGAGAAGAACTTCCTGAGCATGA GCGAGTACCTGGACGCCCGCCATTACGGGTTGAACGGCGAGCGGGCGGGCGGGCGCGGCATGCTCAACGAGCACGGCGAG TACGTCGAAAGCTGGAAGCCGATCGGCGGCAGCAAGGCGCTGTACACGGTCACGGTCAACAAACAGTTTCGTGACCTTGG CGCCACGGTCTATGCCAGCTACAACAAACAGACCTACTGGAACCGGCCGGACACCCAGCGCTGGAACCTGTCGCTGTCGC GCTACTTCAACGTGGGCAGCGTCAAGAACATGAGCCTGTCGCTGAACCTGTACCGCAGCCAGGAATACCAGCACCTGGAC AACGGCATGGCACTCACGGTGAGCCTGCCGCTTGGGCGCACCGGCACCCTGGCGCTGGATGCCAATCGGGCCGGCGGCAA CAACACCTTTTCATCGCGCTACAGCGACCGCATCGACGAGCGCAACAGCTACCAGTTGAGTGCCAGCAACCGTTCGGCCA GTGCGTACTTGAGTCACATGGGCGATCAGGCCGACATCGACCTCAGCGCCAGCACACAGGAAGGCGATTACCGCACCCTC AGCGTATCGGCTCGCGGCGGTGGCACGCTCACGGCCCAGGGCGGGGCGCTGCACCGTACCGGCAGCACCGGCGGCACGCG GTTGATGGTCGATACCGGTGGCGTGCCCGATGTACCGGTGCGCGGGTACGGCTCGCCGACACGCAGCAATGCGTTCGGCA AAGCGGTGATTTCCGACATCAGCAGCTACCAGCGCACGGCGGCGAGCGTCGACCTCGAACGCTTGCCGAGCAACGTCGAA GCCACGCAGTCGGTCACTCAATTGACGCTCACCGAAGGGGCTATCGGCTACCGATCCCTGGACGTGATCGCCGGCGCCAA GGCCATGGCCGTGCTGCGCCTGGCCGACGGCAGCGCACCGCCGTTCGGCGCCACGGTGAAAAACGTCAAGCAACAGGACA CCGGCATCGTCAATGACGACGGCAACGTTTACCTCAGTGGCATCCAGGCCGGCGACGTGATGATCGTCAGTTGGGGCGGA CGCGAGCGCTGCATCCTCACGCTGCCTGCCGTACTGCCCGCCGATGGTTTGACCGATGCCCTGCAACTCGGCTGCCGCCC GGTAGCCGCTGAACAATCCTCGCCCGAGCCAGCCGCGCTGCCCGGGAAGCCCCTCGACATGGAGAACACCGCCACATGA Protein sequence : MTLAGTALGAGDIEFNTDVLDLSDRTNIDLSRFARSGFILPGTYSMVVQLNGQAIPEQSVAFYAPDDDPKGSQACLSASL VEQLGIKAAAAAKFTWWRDGECLDTQSLPGMEVTGDLATSTLTISLPHAYLEYSAINWDPPARWDEGVPGLLVDYNLTAQ SNYRRNDGTRNNLSGNGTVGANAGAWRVRADWQGRVERASEGAYGNQKLEWSRYYAYRAIPALKARLVVGEDYLYSDLFD SFRFTGASLNSDQSQLPPNLRGYAPEVVGVAKTNAKVIISQKGRVLYETLVAAGPFRIQDLHDAVTGSLDVRVEEQDGSV HSFKVDTAGVPYLTRPGQVRYKLAAGRPSNLQYGGDGNMFGTGEFSWGVSNGWSLFGGGMTDNNYRALSVGAGRDLLAFG AVSVDVTQSHAQLWGDTLTGKSYRLQYSKNFEEYDSQVTFAGYRFSEKNFLSMSEYLDARHYGLNGERAGGRGMLNEHGE YVESWKPIGGSKALYTVTVNKQFRDLGATVYASYNKQTYWNRPDTQRWNLSLSRYFNVGSVKNMSLSLNLYRSQEYQHLD NGMALTVSLPLGRTGTLALDANRAGGNNTFSSRYSDRIDERNSYQLSASNRSASAYLSHMGDQADIDLSASTQEGDYRTL SVSARGGGTLTAQGGALHRTGSTGGTRLMVDTGGVPDVPVRGYGSPTRSNAFGKAVISDISSYQRTAASVDLERLPSNVE ATQSVTQLTLTEGAIGYRSLDVIAGAKAMAVLRLADGSAPPFGATVKNVKQQDTGIVNDDGNVYLSGIQAGDVMIVSWGG RERCILTLPAVLPADGLTDALQLGCRPVAAEQSSPEPAALPGKPLDMENTAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 7e-160 | 46 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-153 | 44 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 6e-152 | 44 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 5e-152 | 44 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 4e-153 | 44 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 4e-153 | 44 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 4e-153 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H045_02405 | YP_007396053.1 | putative fimbrial outer membrane usher protein | VFG1548 | Protein | 1e-153 | 44 |
| H045_02405 | YP_007396053.1 | putative fimbrial outer membrane usher protein | VFG0884 | Protein | 2e-153 | 44 |
| H045_02405 | YP_007396053.1 | putative fimbrial outer membrane usher protein | VFG0895 | Protein | 2e-153 | 44 |
