Gene Information

Name : H045_23520 (H045_23520)
Accession : YP_007400258.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5375571 - 5376965 bp
Length : 1395 bp
Strand : +
Note : COG0305 Replicative DNA helicase

DNA sequence :
ATGAACGATATCTCCGCTCCTGAGCAATACGATCTGCAAACCGCTGCCCTGAAGGTGCCGCCGCATTCCATCGAGGCCGA
ACAGGCCGTGCTCGGTGGCCTGATGCTGGACAACAACGCCTGGGAGCGCGTGCTGGATCAAGTTTCGGATGGCGATTTCT
ATCGGCATGACCACCGTCTGATCTTCCGCGCCATCGCCAAGCTGGCCGACCTGAACTCACCGATCGACGTCGTGACCCTC
GCCGAGCAGTTGGACAAGGAGGGTCAGACCTCACAGGTTGGTGGCCTGGGTTACCTCGGTGAGCTGGCGAAAAACACGCC
GTCCGTCGCCAACATCAAGGCCTATGCGCAGATCGTTCGCGCCCGTGCCACGTTGCGTCAGTTGATCGGCATCGCCACCG
AAATCGCCGACAGCGCCTTCAACCCCGAAGGCCGCACCGCCGAAGAAATCCTCGACGAGGCCGAACGGCAGATCTTCCAG
ATCGCCGAAGCGCGTCCCAAGACCGGCGGCCCGGTCGGTGTCAATGAGCTGCTGACCAAGGCGATCGATCGCATCGACAC
CCTGTTCAACACCGATAACGCCATCACCGGCCTCTCCACTGGCTACACCGACCTCGACGGCATGACCAGCGGCCTGCAGC
CGGCGGACTTGATCATCGTGGCCGGCCGTCCGTCCATGGGCAAGACCACCTTCGCCATGAACCTGGTGGAAAACGCCGTG
TTGCGCAGTGACAAGAGCGTGTTGGTGTACTCCCTGGAGATGCCAGGTGAATCGCTGATCATGCGGATGCTTTCGTCGCT
GGGCCGAATCGACCAGACCAAAGTCCGTGCCGGTCGCCTGGAAGACGACGACTGGCCGCGCCTGACCTCGGCGGTCAACC
TGCTCAACGACCGCAAGCTGTTCATCGATGACACCGCCGGCATCAGCCCCTCGGAAATGCGCGCGCGTACTCGACGCCTG
GTGCGCGAGCATGGCGATGTGGCACTGATCATGATCGACTACCTGCAGCTCATGCAGATTCCGGGTTCGGGGGGCGACAA
CCGTACCAACGAGATCTCCGAGATTTCCCGTTCCTTGAAAGCCCTGGCCAAGGAGTTCAACTGCCCGGTGGTTGCGCTGT
CCCAGCTCAACCGTTCCCTGGAGCAACGTCCGAACAAACGCCCGATCAACTCCGACTTGCGTGAATCCGGAGCGATCGAG
CAGGATGCCGACGTGATCATGTTCGTGTATCGCGACGAGGTGTATCACCCGGAAACCGAACACAAGGGCATCGCCGAAAT
CATCATCGGCAAGCAGCGTAACGGCCCGATCGGCACTACGCGCCTGGCGTTTATCGGCAAGTACACGCGATTCGAAAATC
TTGCGCCGGGCAGTTACAACTTCGACGACGAGTAA

Protein sequence :
MNDISAPEQYDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAIAKLADLNSPIDVVTL
AEQLDKEGQTSQVGGLGYLGELAKNTPSVANIKAYAQIVRARATLRQLIGIATEIADSAFNPEGRTAEEILDEAERQIFQ
IAEARPKTGGPVGVNELLTKAIDRIDTLFNTDNAITGLSTGYTDLDGMTSGLQPADLIIVAGRPSMGKTTFAMNLVENAV
LRSDKSVLVYSLEMPGESLIMRMLSSLGRIDQTKVRAGRLEDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRARTRRL
VREHGDVALIMIDYLQLMQIPGSGGDNRTNEISEISRSLKALAKEFNCPVVALSQLNRSLEQRPNKRPINSDLRESGAIE
QDADVIMFVYRDEVYHPETEHKGIAEIIIGKQRNGPIGTTRLAFIGKYTRFENLAPGSYNFDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-120 58
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-107 55
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-104 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 9e-105 52
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 7e-104 51
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-98 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 7e-95 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 7e-95 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 3e-79 42