Gene Information

Name : H045_22385 (H045_22385)
Accession : YP_007400031.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : putative integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5092726 - 5093250 bp
Length : 525 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGCGTGAAGACGGTGAGCAACTCGGTCGATTCAAAGTGCGTAGCTTGATACGCGAGCTTGAATTAGTCAGCAAACAACC
CGGCTCCCATGCCTACAAACGAGCAACAGTAGAAAGACTGGATATCCCGAACACATTGAACCGCGAGTTCGACGTGCCAG
CGCCCAATCAAGTCTGGTGCGGCGATATCACCTACATTTGGGCTCAAGGAAAGTGGCATTACCTGGCTGTAGTCCTGGAT
CTTTATGCGCGTCGGATCGTAGGCTGGGCACTGTCGGAAAAGCCAGACGCTGAGCTGGTGATCAAAGCGCTGGATATGGC
TTACGAGCAGCGTGGCAGGCCTTCGGACCTGCTATTCCACTCGGACAGTAAGAATGTGATCGCAATATGCAAGCCGACTC
TTTCGCCAACGGTTGTGGCGATACCGCATGCGCCAGAGCATGAGCCGACGAGGAAACTGCTGGGGTTCTCAGTTCACTAT
GTTCAAGAGCGTCAGCTCAATTTGACTCGTGCTGGGATTGGCTAG

Protein sequence :
MREDGEQLGRFKVRSLIRELELVSKQPGSHAYKRATVERLDIPNTLNREFDVPAPNQVWCGDITYIWAQGKWHYLAVVLD
LYARRIVGWALSEKPDAELVIKALDMAYEQRGRPSDLLFHSDSKNVIAICKPTLSPTVVAIPHAPEHEPTRKLLGFSVHY
VQERQLNLTRAGIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l0006 CAD33765.1 L0006 protein Not tested PAI I 536 Protein 3e-33 55
unnamed CAD42035.1 hypothetical protein Not tested PAI II 536 Protein 3e-31 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_22385 YP_007400031.1 putative integrase VFG1506 Protein 1e-33 55
H045_22385 YP_007400031.1 putative integrase VFG1554 Protein 1e-31 53