Gene Information

Name : H045_22175 (H045_22175)
Accession : YP_007399989.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : S1 RNA binding domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5047984 - 5050320 bp
Length : 2337 bp
Strand : -
Note : COG2183 Transcriptional accessory protein

DNA sequence :
ATGGACAGCATCAACAGCCGCATCGCCGAAGAACTCGGCGTACGCCCCCAACAGGTCGAAGCGGCCGTCGCTCTACTGGA
TGAAGGCTCCACGGTGCCTTTCATCGCCCGTTACCGTAAGGAAGTGACCGGCAGCCTCGACGACATTCAGCTACGGCACC
TGGAAGAACGCCTGCGCTACCTGCGAGAACTCGACGAACGGCGCATCAGCATCCTCGCCAGCATCGAGGAACAGGGCAAG
CTCACCCCGCAACTTGAGCGCGATATCAAGCTCGCCGACACCAAGACCCGCCTCGAAGACCTTTACCTGCCCTACAAGCA
AAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTCGGCGATCTGGCCGACGGCCTGTTCAACGATCCGTTGC
TGAGCCCGGAAGCCGAAGCCGCACGCTTCATCGATGCCGACAAGGGCGTCGCCGACGTCAAGGCCGCTCTCGAAGGCGCC
AAGTACATCCTCATGGAGCGCTTCGCCGAAAACGCCAACCTGCTGGAAAAACTGCGCAACTACCTCAAGCAGGAAGCCGT
GCTCAGCGCCCGCGTCATCGCCGGCAAAGAGGAAGAAGGCGCCAAGTTCCGTGATTACTTCGAGCACGACGAACCGCTCA
AGAGCATGCCGTCGCACCGCGCGCTGGCCATTTTTCGCGGTCGCAACGAAGGCATTCTCAGCTCTGCGCTCAAAGTCGGC
GACGAATTGCCGGGCACCATGCACCCGTGCGAAGGCATGATCGGGCAACAATTCGGTATCCAGAACCAGAACCGTCCTGC
GGACAAGTGGCTCGGTGAAGTCGTGCGCTGGACCTGGAAGGTCAAGCTCTACACCCACCTGGAAACCGACCTGCTGGGCG
AACTGCGTGACGGCGCCGAAACCGAGGCGATCAACGTGTTCGCCCACAACCTGCACGACCTGCTGCTGGCCGCCCCCGCC
GGCCCGCGCGCCACCCTGGGCCTGGACCCCGGCCTGCGCACCGGTTGCAAGGTCGCGGTGGTCGACGCCACCGGCAAGCT
GCTGGACCACGCCACCGTGTACCCGCATGTGCCGCACAACAAGTGGGATCAGACCCTCGCCATCCTGGCCGCACTGTGCG
CCAAGCATTCGGTGGACCTGATCGCCATCGGCAACGGCACCGCCAGCCGTGAAACCGACAAGCTGGCCGCCGAGCTGATC
AAAAAATACCCGGCCATGAAGATGACCAAAGTCATGGTCTCCGAGGCCGGTGCGTCGGTGTACTCGGCGTCGGAATTGGC
GTCCAGAGAGTTCCCGGACCTCGACGTGTCGATCCGAGGTGCGGTGTCCATCGCCCGCCGCCTGCAGGATCCGCTGGCGG
AGCTGGTGAAGATCGACCCCAAATCCATCGGCGTCGGCCAGTACCAGCACGACGTGTCGCAGCTGAAACTGGCGCGCGGC
CTGGATGCCGTGGTGGAAGACTGCGTAAACGCCGTGGGCGTGGACGTGAACACTGCCTCGGTGGCGCTGCTGGCACGTAT
CTCCGGCCTCAACGCGACACTGGCGCAGAACATCGTCACCCACCGCGATCAGAACGGCGCGTTCAAAACCCGCGCCGCGC
TGAAAAAAGTCGCACGTCTGGGTGAAAAAACCTTCGAACAGGCTGCCGGTTTCCTGCGCGTCATGAATGGCGACAACCCG
CTGGATTCGTCCGCCGTCCACCCGGAAGCCTACCCACTGGTGCAACGCATCGCCGCCGAAACCGACCGCGACATTCGCTC
GCTGATCGGCGACGCCGCGTTCCTCAAGCGCCTGGACCCGAAGAAATACACCGACGAAACCTTCGGTGTACCGACCATCA
CCGACATTCTGCAAGAGCTGGAGAAACCCGGTCGCGACCCGCGTCCCGAGTTCAAGACCGCCGAATTCCAGGATGGCGTC
GAAGACCTCAAAGACCTGCAGCCGGGCATGATCCTCGAAGGCGTGGTGACCAACGTGACCAACTTCGGCGCGTTCGTGGA
CATTGGCGTGCACCAGGACGGCCTGGTACACATCTCCGCGTTGTCGGAGAAGTTCATCAAGGACCCGCGCGAAGCGGTCA
AGGCCGGTGACGTGGTCAAGGTCAAGGTCATGGAAGTCGACATCCCGCGCAAACGCGTGGGCCTGTCGATGCGCATGAGC
GACACCCCCGGCGAGAAAGTCGACGGTGCACGCGGCGCGCGTCCGGGCTCGGCACCGCGTCAGTCGCAGAATCGCTCGGA
AAACAGCCAACCGCGCAAGGAAACCGCGACCGCGGCGCCGGCCAACAACGCCATGGCCTCGCTGTTCGCCAACGCCAAGC
AGTTAAAGAAACGCTAG

Protein sequence :
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDIQLRHLEERLRYLRELDERRISILASIEEQGK
LTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGDLADGLFNDPLLSPEAEAARFIDADKGVADVKAALEGA
KYILMERFAENANLLEKLRNYLKQEAVLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAETEAINVFAHNLHDLLLAAPA
GPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHNKWDQTLAILAALCAKHSVDLIAIGNGTASRETDKLAAELI
KKYPAMKMTKVMVSEAGASVYSASELASREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVTHRDQNGAFKTRAALKKVARLGEKTFEQAAGFLRVMNGDNP
LDSSAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDPKKYTDETFGVPTITDILQELEKPGRDPRPEFKTAEFQDGV
EDLKDLQPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKVDGARGARPGSAPRQSQNRSENSQPRKETATAAPANNAMASLFANAKQLKKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 61