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Name : gabD (H045_21960) Accession : YP_007399948.1 Strain : Pseudomonas poae RE*1-1-14 Genome accession: NC_020209 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 4999304 - 5000746 bp Length : 1443 bp Strand : + Note : COG1012 NAD-dependent aldehyde dehydrogenases DNA sequence : ATGCAGCTCAAAGATACCCAGTTGTTCCGCCAACAAGCCTTTATCGACGGCGTTTGGGTCGACGCGGACAACGGTCAAAC CATCAAGGTCAATAACCCGGCCACGGGCGAGATTCTCGGCAGTGTGCCGAAGATGGGCGCCGCGGAAACCCGCCGTGCCA TCGAGGCCGCCGACAAGGCGCTGCCGGCCTGGCGTGCACTCACTGCCAAGGAGCGCGCGAACAAGCTGCGCCGTTGGTTC GAGCTGCTGATCGAAAACCAGGACGACCTCGCTCGCCTGATGACCCTTGAGCAGGGCAAGCCGCTGGCCGAAGCCAAGGG CGAAATCGTCTACGCCGCGTCCTTTATCGAGTGGTTTGCCGAAGAGGCCAAGCGCATCTACGGCGATGTGATTCCTGGCC ACCAGCCCGACAAGCGCCTCATCGTGCTCAAGCAGCCGATCGGCGTGACCGCTGCCATCACCCCGTGGAACTTCCCCGCC GCGATGATCACCCGTAAGGCCGGCCCGGCCCTGGCCGCCGGTTGCACCATGGTGATCAAGCCGGCGTCGCAGACGCCGTT CTCGGCCCTGGCGCTGGTTGAGCTGGCGCACCGTGCCGGTATCCCGCAAGGGGTGCTGAGTGTGGTCACCGGCAGCGCCG GCGACATCGGCGGCGAGCTGACCAGCAACCCGATCGTGCGTAAATTGTCGTTCACCGGTTCCACCGAAATCGGTCGCCAG CTGATGGCTGAATGCGCCAAGGACATCAAGAAAGTGTCCCTGGAACTGGGCGGCAACGCGCCGTTTATCGTGTTCGATGA CGCTGACCTGGACAAGGCCGTCGAAGGCGCGATCATCTCCAAGTACCGCAACAACGGTCAGACCTGCGTCTGCGCCAACC GCCTGTACATTCAGGATTCGGTGTACGACGCGTTCGCCGAAAAACTAAAAGTTGCCGTGGCCAAATTGAAGATCGGCAAC GGTCTGGAAGATGGCACCACCACCGGCCCGCTGATCGACGAAAAAGCCGTGGCCAAGGTCAAGGAACACATCGCTGATGC CCTGAGCAAAGGCGCGAAGCTGTTGGCCGGTGGCAAGGCGATGGAAGGCAACTTCTTCGAGCCGACCATTCTGGTGGATG TGCCGAAAAACGCCGCCGTGGCGAAGGAAGAAACCTTCGGCCCGCTGGCGCCGCTGTTCCGTTTCAAAGACGAAGCCGAA GTGATCGCGATGTCCAACGACACCGAGTTCGGCCTGGCGTCCTACTTCTATGCCCGCGACCTGGGCCGTGTGTTCCGTGT GGCGGAAGCGCTGGAATACGGCATGGTCGGCGTCAACACCGGCTTGATCTCCAACGAAGTGGCGCCGTTCGGCGGCATCA AGGCGTCGGGCCTGGGCCGTGAAGGCTCCAAGTACGGGATCGAGGATTACCTGGAAATCAAATACCTCTGCCTGGGCATC TAA Protein sequence : MQLKDTQLFRQQAFIDGVWVDADNGQTIKVNNPATGEILGSVPKMGAAETRRAIEAADKALPAWRALTAKERANKLRRWF ELLIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFAEEAKRIYGDVIPGHQPDKRLIVLKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVIKPASQTPFSALALVELAHRAGIPQGVLSVVTGSAGDIGGELTSNPIVRKLSFTGSTEIGRQ LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDSVYDAFAEKLKVAVAKLKIGN GLEDGTTTGPLIDEKAVAKVKEHIADALSKGAKLLAGGKAMEGNFFEPTILVDVPKNAAVAKEETFGPLAPLFRFKDEAE VIAMSNDTEFGLASYFYARDLGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-156 | 67 |
