Gene Information

Name : H045_21815 (H045_21815)
Accession : YP_007399919.1
Strain : Pseudomonas poae RE*1-1-14
Genome accession: NC_020209
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4964844 - 4965236 bp
Length : 393 bp
Strand : -
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
ATGTTTATGACTAATAGCAACGACAAGAGTGGGGAGCTTTTGGGCCAGGAGCGGCGGCGCCGCTGGAGCCCGGAGCAAAA
ACTGGCCATGGTTCGCGAGAGTCTTGAGCCAGGGCAAAGCGTTTCGGTGGTCGCTCGACGCAACGGCATCAATGCCAACC
AGCTGTTCCTATGGCGCAAGTTATATCAGGACGGCAGTCTGTCGGCGGTCAGTGCCGGTGAAGCCGTTGTGCCCGCCTCG
GAGCTGAGCGATGCGCTCAAGCAGATCCGTGAACTGCAACGGATGCTGGGCAAGAAAACGATGGAAGCAGAAATCCTCAA
AGAGGCCGTGGAGATCGCCCGGTCGCGAAAATGGATTGCGCACTCACCCTTGTTGCCGGGGGACGACCAGTGA

Protein sequence :
MFMTNSNDKSGELLGQERRRRWSPEQKLAMVRESLEPGQSVSVVARRNGINANQLFLWRKLYQDGSLSAVSAGEAVVPAS
ELSDALKQIRELQRMLGKKTMEAEILKEAVEIARSRKWIAHSPLLPGDDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 3e-27 68
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-27 68
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 3e-27 68
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 6e-39 66
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 6e-39 66
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 6e-39 66
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 8e-39 66
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 8e-39 66
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 8e-39 66
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 7e-39 66
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-38 65
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 2e-38 65
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 2e-38 65
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 3e-39 61
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 3e-26 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H045_21815 YP_007399919.1 putative transposase VFG0648 Protein 2e-39 66
H045_21815 YP_007399919.1 putative transposase VFG0609 Protein 6e-39 65
H045_21815 YP_007399919.1 putative transposase VFG0622 Protein 6e-39 65
H045_21815 YP_007399919.1 putative transposase VFG1733 Protein 7e-27 59